Gene
Gene Model ID | pfu_aug1.0_4165.1_23516 |
---|---|
Locus | scaffold4165.1 : 34966 ... 46496 : + |
To GenomeBrowser | scaffold4165.1:34966..46496 |
Genes list of scaffold | scaffold4165.1 |
Synonym | pfu_aug2.0_134.1_13662 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_4165.1_23516.t1 | 1 | 1 | Arginase | 15 | 272 | 0.0 | 226.1 | 0.0 | 0.0 | 225.7 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_4165.1_23516.t1 | gi|328933188|gb|AEB70965.1| | arginase type I-like protein [Hyriopsis cumingii] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
egg-Dshape | 1 |
trochophore | 1 |
>Adult tissues | |
pearlSac | 1 |
Transcript
Transcript ID | pfu_aug1.0_4165.1_23516.t1 |
---|---|
Definition | - |
>pfu_aug1.0_4165.1_23516.t1 atgcgtgaagggggtttgatctctaagttggaggggctcgggcttgacgtggaggatcagggggacctatttctggagaa acatgacgaagacattcacgaccatcccgccaaaaatgttaaaaatgttggatccgcatcaagccagattgcagactctg tgtacaatacgatcaagtcaggcagaacatgtttagcccttggtggagatcacagtatggcgattggttccatctacggt cattcattggctgaacccgatcacgtggttatttgggttgatgcgcacgcagatatcaacacaccccttacttccagcag cggcaacatgcatgggatgccgctttctttcttggtgaaggaggttcaaccatatctcccggacatcccacattttgata acatcaaaccatgtttgtctgcgaaaaatattgcgtacatcggtcttagggatgttgatcctggagagagatatatcatt gaaaaactcggcatccattccttctccatgacagaagtagacaagtttggaatcaaagattgtgtggagaaagctctaca cgccgtagatcccgagggtaacaaacctatccatctgagttttgacatcgacgccctggatccctccctggcaccaagca ctggtaccccagttcccgggggtctcagcatcagggaaggcaactatatcgcagaggaattagctgcaacaggtcgcctt acatgcgtcgacttagcagaggtgaacccaaagctcggaaacgaccgtgacaatgaaacgaccgtccgatcagccattac aatcattcagcactgttttggtaacagacggcagggagtgtatccaaaagactacaaattccccattccggaaaaagtag tccttcccatgccatcataa |
Protein
Protein ID | pfu_aug1.0_4165.1_23516.t1 |
---|---|
Definition | - |
>pfu_aug1.0_4165.1_23516.t1 MREGGLISKLEGLGLDVEDQGDLFLEKHDEDIHDHPAKNVKNVGSASSQIADSVYNTIKSGRTCLALGGDHSMAIGSIYG HSLAEPDHVVIWVDAHADINTPLTSSSGNMHGMPLSFLVKEVQPYLPDIPHFDNIKPCLSAKNIAYIGLRDVDPGERYII EKLGIHSFSMTEVDKFGIKDCVEKALHAVDPEGNKPIHLSFDIDALDPSLAPSTGTPVPGGLSIREGNYIAEELAATGRL TCVDLAEVNPKLGNDRDNETTVRSAITIIQHCFGNRRQGVYPKDYKFPIPEKVVLPMPS |