Gene
Gene Model ID | pfu_aug1.0_4230.1_16315 |
---|---|
Locus | scaffold4230.1 : 12816 ... 17482 : + |
To GenomeBrowser | scaffold4230.1:12816..17482 |
Genes list of scaffold | scaffold4230.1 |
Synonym | pfu_aug2.0_3.1_10055 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_4230.1_16315.t1 | 3 | 1 | AIG1 | 79 | 206 | 1.1e-15 | 57.3 | 2.1e-17 | 1.5e-13 | 50.3 |
pfu_aug1.0_4230.1_16315.t1 | 3 | 2 | AIG1 | 221 | 252 | 1.1e-15 | 57.3 | 0.0032 | 23.0 | 3.9 |
pfu_aug1.0_4230.1_16315.t1 | 3 | 3 | AIG1 | 262 | 287 | 1.1e-15 | 57.3 | 0.084 | 620.0 | -0.7 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_4230.1_16315.t1 | gi|189529784|ref|XP_001345011.2| | 5.0e-15 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
>Adult tissues |
Transcript
Transcript ID | pfu_aug1.0_4230.1_16315.t1 |
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Definition | - |
>pfu_aug1.0_4230.1_16315.t1 atgcgcatctcgacacaatgttttgatttatattcatttcaagaatggcggtgtgtggtatgttccttcattaatcgacc aaagcagcgggtatgttacgtgtgtaaagcaaagaaaggtgaatgtagcagtcccctgtcacaggaatataccgctacag agccaggtccttcgccatatcctgacaaatcggaggtatatgatccaatggataatagtcttgggagcggtgaattacgg gttgtggtcatcggaaattccagacatgccaaaaacttagctggtgatctcatccttgaagaacagacatttccatcaag ggagcgggacaaccgatgtcgtgttggctttttatcatacaaaagcctcagtctgagcgtggtgaacacgcctgccttgt ttgattcagagctgaaagaacataaaatccagagagaattcagacggatgatattgctatcctctcctggacctcatctc tttcttcatgtcgtagacgaggatgacccggagaataatgaagatacactaggtcaatttattggcctttttggtgaaga tatgcttaaattcacaatgaagctctgcataagtcgcgaaactaaatcagcagaatcaatggagggtacactcacactat cagacttaggaaattcccaccaacaaatccttctggaatccattgaaaatttcattatgaaaaacggaggagctcacttc ggacatgaactgttcgtggagatacatcaactggttcaacactgcgctgatggtaaattgaagaaagatgaggaacttgt acagaaagtcagggatttagagaaagaaaaggagaaaatgaggcttcagtatcgatactttgagattttcaatacgtatc gatacacaaatgctgagtatcgatattctcaatacatttga |
Protein
Protein ID | pfu_aug1.0_4230.1_16315.t1 |
---|---|
Definition | - |
>pfu_aug1.0_4230.1_16315.t1 MRISTQCFDLYSFQEWRCVVCSFINRPKQRVCYVCKAKKGECSSPLSQEYTATEPGPSPYPDKSEVYDPMDNSLGSGELR VVVIGNSRHAKNLAGDLILEEQTFPSRERDNRCRVGFLSYKSLSLSVVNTPALFDSELKEHKIQREFRRMILLSSPGPHL FLHVVDEDDPENNEDTLGQFIGLFGEDMLKFTMKLCISRETKSAESMEGTLTLSDLGNSHQQILLESIENFIMKNGGAHF GHELFVEIHQLVQHCADGKLKKDEELVQKVRDLEKEKEKMRLQYRYFEIFNTYRYTNAEYRYSQYI |