Gene
Gene Model ID | pfu_aug1.0_447.1_29266 |
---|---|
Locus | scaffold447.1 : 31516 ... 50205 : - |
To GenomeBrowser | scaffold447.1:31516..50205 |
Genes list of scaffold | scaffold447.1 |
Synonym | pfu_aug2.0_1269.1_31580 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_447.1_29266.t1 | 2 | 1 | PCI | 183 | 218 | 1.5e-19 | 70.1 | 0.39 | 1900.0 | -0.9 |
pfu_aug1.0_447.1_29266.t1 | 2 | 2 | PCI | 269 | 364 | 1.5e-19 | 70.1 | 1.2e-22 | 5.8e-19 | 68.3 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_447.1_29266.t1 | gi|307172336|gb|EFN63824.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
egg-4cell | 1 |
8-16cell | 1 |
egg-Dshape | 1 |
>Adult tissues | |
Dshape | 1 |
adductorMuscle | 1 |
maleGonad | 1 |
Transcript
Transcript ID | pfu_aug1.0_447.1_29266.t1 |
---|---|
Definition | - |
>pfu_aug1.0_447.1_29266.t1 atggcttccaatgtgcgacagcaactgtcacaactggcaactctgtctcattctggtggttctcacaaggaagtgacaga aaaatataaagggattttggagggaatactgaagtcaggaggcagtgatttagtagcaagcctgcaagcttttgttgaag cattggtaaatgagaatgtcagccttgtcatatcccgacaactcctcacagatttctgctcacatctaccaaagttagat gatgttgtggccaaacaaatcgctcattttacactggagaaagttcacacaagggtcatttcctttgaggagcaggtggc cgccattagacagcatctggctgatatttatgagagagaacagtcgtttagggaggctgctaatgtactggtggggatac cactagagacaggacagaaacagtatcccactgactacaagttagagacatacctaaaaatagctcgtctgtatctagaa gaggatcccatccaggctgaggcttatataaatagagcgtcacttctacaggccgactccaaaaatgaggaacttcagat acattacaaggcttgttatgcccgtgtcttggattatagaaggaagtttattgaggctgcacagagatataatgaacttt catacaaaaatatcatagcagatgcggagaggatgacagccctaaaaaacgccctgatctgtacagttttagcttctgct ggtcagcaaagatcaaggatgctagccacattattcaaagacgagcgatgtcagcaactaccagcttataatattttaga gaaaatgtacttagacaggataatcagaagtagtgatctacaagaattctctgcccttctccagccacatcagaaagctg ttacatcagatggttccaccatacttgatagagctgtaatagagcataaccttctctctgccagtaaactatataataat atctcatttgaggaacttggctcacttctggaaattcctccttcaaaggcagaaaagattgcatcacaaatgataacaga aggtagaatgaatggctgtatagatcaaattgactccatagttcactttgaagcaagagaagccttaccaacgtgggaca agcaaattcagagtctctgtttccaagtcaataacattattgaaaaaatatcccaccatgcaccagaatggatgaaccgg acaattgaagctcagatggccgagacgtga |
Protein
Protein ID | pfu_aug1.0_447.1_29266.t1 |
---|---|
Definition | - |
>pfu_aug1.0_447.1_29266.t1 MASNVRQQLSQLATLSHSGGSHKEVTEKYKGILEGILKSGGSDLVASLQAFVEALVNENVSLVISRQLLTDFCSHLPKLD DVVAKQIAHFTLEKVHTRVISFEEQVAAIRQHLADIYEREQSFREAANVLVGIPLETGQKQYPTDYKLETYLKIARLYLE EDPIQAEAYINRASLLQADSKNEELQIHYKACYARVLDYRRKFIEAAQRYNELSYKNIIADAERMTALKNALICTVLASA GQQRSRMLATLFKDERCQQLPAYNILEKMYLDRIIRSSDLQEFSALLQPHQKAVTSDGSTILDRAVIEHNLLSASKLYNN ISFEELGSLLEIPPSKAEKIASQMITEGRMNGCIDQIDSIVHFEAREALPTWDKQIQSLCFQVNNIIEKISHHAPEWMNR TIEAQMAET |