Gene
Gene Model ID | pfu_aug1.0_447.1_29267 |
---|---|
Locus | scaffold447.1 : 64516 ... 81865 : + |
To GenomeBrowser | scaffold447.1:64516..81865 |
Genes list of scaffold | scaffold447.1 |
Synonym | pfu_aug2.0_2993.1_12341 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_447.1_29267.t1 | 1 | 1 | TCR | 309 | 336 | 6.5e-06 | 25.9 | 1.4e-09 | 1.0e-05 | 25.2 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_447.1_29267.t1 | gi|118404776|ref|NP_001072590.1| | protein lin-54 homolog [Xenopus (Silurana) tropicalis] | 1.0e-19 |
Transcript
Transcript ID | pfu_aug1.0_447.1_29267.t1 |
---|---|
Definition | - |
>pfu_aug1.0_447.1_29267.t1 atggaatcccagaacactgaactaatacagaatttttacctaaaatatgggtggaaagtttcctggaaaatcattgattc tcggacgagaagcattgggaatgaggagacgttgaaagtgattgccgtagacgtacactctggtgaagttgtatctcaac ccggaacaaacatagacaactctgctactaacagtaataggagtattaacttcttggatgtacccatatctgtcaactta aacaacaagtcagagggattaaatagtgttggatatcaggagaccataataggtgttagtgattcttcaaatgggacaaa cagtactgcttctgtgaattcggaacaagctaattctacaagtgctacaacaactgtgatactggcaaaaacagtcccca gtagtactaatgatctacgaactgtgaatagtaacaatgaaattgcctccacttctcagtctctcaaacgacaactttca tctccctcaagtcctatcatacataaagtcattataacaaaaaatcctaattcatcgcaaccacaggtgaaatcaaagcc tggtacagttaaccagcctgtacagaggattatattaccagctgcccccaatcagatccgagcggctacggctgtcagcc aggtgttaacgacaacgacgcttgctcagatccgacccagtgtaccgtcagttacctctctcccagcaggggctacgata ctggcttcgggaggaagtggtggtacagtacaaagctttgctcttgttccagcgtcttatgtagctcagttgacccagct tcaaagtaaaccccagcagactatggtacaacaaccagtgcccattcagcaagcccctccccagcccattcaggctcgac aagatttcatacccatcattagtaatgacacggctactagtgctaatcaaagatattgtgactgttttgctaatggtgaa ttttgccataattgtaactgtaataattgtgccaataacttggaacatgaagaggaaagatctagggcgatcaaatcttg tttagacagaaatcccatggcatttcacccaaagattgctaatggaataatgttttctcccattcctcatttacctggaa attttgaaaagggaatgaggatatga |
Protein
Protein ID | pfu_aug1.0_447.1_29267.t1 |
---|---|
Definition | - |
>pfu_aug1.0_447.1_29267.t1 MESQNTELIQNFYLKYGWKVSWKIIDSRTRSIGNEETLKVIAVDVHSGEVVSQPGTNIDNSATNSNRSINFLDVPISVNL NNKSEGLNSVGYQETIIGVSDSSNGTNSTASVNSEQANSTSATTTVILAKTVPSSTNDLRTVNSNNEIASTSQSLKRQLS SPSSPIIHKVIITKNPNSSQPQVKSKPGTVNQPVQRIILPAAPNQIRAATAVSQVLTTTTLAQIRPSVPSVTSLPAGATI LASGGSGGTVQSFALVPASYVAQLTQLQSKPQQTMVQQPVPIQQAPPQPIQARQDFIPIISNDTATSANQRYCDCFANGE FCHNCNCNNCANNLEHEEERSRAIKSCLDRNPMAFHPKIANGIMFSPIPHLPGNFEKGMRI |