Gene
Gene Model ID | pfu_aug1.0_4475.1_59524 |
---|---|
Locus | scaffold4475.1 : 1 ... 20317 : + |
To GenomeBrowser | scaffold4475.1:1..20317 |
Genes list of scaffold | scaffold4475.1 |
Synonym | pfu_aug2.0_107.1_23472 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_4475.1_59524.t1 | 3 | 1 | Carb_anhydrase | 17 | 219 | 0.0 | 368.4 | 0.0 | 0.0 | 205.4 |
pfu_aug1.0_4475.1_59524.t1 | 3 | 2 | Carb_anhydrase | 225 | 290 | 0.0 | 368.4 | 2.5e-09 | 1.9e-05 | 23.7 |
pfu_aug1.0_4475.1_59524.t1 | 3 | 3 | Carb_anhydrase | 296 | 443 | 0.0 | 368.4 | 1.20512e-43 | 9.2e-40 | 136.2 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_4475.1_59524.t1 | gi|60266933|gb|AAX16122.1| | carbonic anhydrase precursor [Tridacna gigas] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
egg-Dshape | 1 |
>Adult tissues | |
Dshape | 1 |
mantle | 1 |
mantlePallium | 1 |
Transcript
Transcript ID | pfu_aug1.0_4475.1_59524.t1 |
---|---|
Definition | - |
>pfu_aug1.0_4475.1_59524.t1 gtattggtcaaaagtaaaaactgaaaaacaacggacattcaggtattggtcaaaaagtaaaaaactgaaaaacaacggac attcagctgtagttgaggtgaatggggacgtcagagtgtcgggaggaagtcttggagaggtatataaaacagcacagttt catttccactggggtcgtaacagcgctgtgggctccgaacatacttacaacggagtttcttatccgattgagctacacat tgtgaactataactcaaagtatcaaagaattgaagatgctctcactcgagacgatggattggcggtgctgggatacttct ttgagatttctagtacagataacccaaagttagcaccatttattgatcatctgaccgacgttaaaggaaaagataacgag acagcgttgccgagttttccgttgactaacgttctaggatatgatcatgacctttactacagataccaaggtagcttgac cacacctggttgtttcgaaagtgtcaaatggacagtattctacgaaaagttaatgatctctgaaagtcagatggagaagt tcagagcactgttttatgatgacgctatgacagtaccaatggttgacaactacagacctccacaaagtatatacaacaga actatctacaggagcttcagtcccaccgcccagtggagttaccatggaagccaaggccctaaccagtggtctataggtta cccaatctgcagtaggagtcaccagtcacctattgacctaccaccatggattgaaatggaacgccatgacaaactcgttc ctttcacttttgagaatttcaacaacccaatgaagtacaacctcaccctgaagaacaacggacatgcagacaatacaatc tttgttctctttgtttgtcagcttcatgttgtgaactacaattatgccaagtacagtacactaggcgaggccgctgacaa gccagacggattagcagttttaggatatttctttgaggtgtctgacatccataattgcaattttgcaccaattcttgacc gtttcaaccatatttccaaaaagggttatagtgcacacattcctaacttcaaactgagccatgtcttgggacgagaccac gccaagtattatcggtaccaaggaagcttgaccacacctccctgttatgaaagcgtcacatggacagtcttccacgaaaa gttacccatctccgtggaacagcttgccatgttccggggattgttcacagacaaggctggtacacaggtaatggtagaca actggaggcctcctctaccacggaatgacaggaaggtttatatcagctttgatctagatacaagtaccgcctccaccacc atctacagcatcacatcattgacattctcagtattaatggtcattttgtcgtga |
Protein
Protein ID | pfu_aug1.0_4475.1_59524.t1 |
---|---|
Definition | - |
>pfu_aug1.0_4475.1_59524.t1 YWSKVKTEKQRTFRYWSKSKKLKNNGHSAVVEVNGDVRVSGGSLGEVYKTAQFHFHWGRNSAVGSEHTYNGVSYPIELHI VNYNSKYQRIEDALTRDDGLAVLGYFFEISSTDNPKLAPFIDHLTDVKGKDNETALPSFPLTNVLGYDHDLYYRYQGSLT TPGCFESVKWTVFYEKLMISESQMEKFRALFYDDAMTVPMVDNYRPPQSIYNRTIYRSFSPTAQWSYHGSQGPNQWSIGY PICSRSHQSPIDLPPWIEMERHDKLVPFTFENFNNPMKYNLTLKNNGHADNTIFVLFVCQLHVVNYNYAKYSTLGEAADK PDGLAVLGYFFEVSDIHNCNFAPILDRFNHISKKGYSAHIPNFKLSHVLGRDHAKYYRYQGSLTTPPCYESVTWTVFHEK LPISVEQLAMFRGLFTDKAGTQVMVDNWRPPLPRNDRKVYISFDLDTSTASTTIYSITSLTFSVLMVILS |