Gene
Gene Model ID | pfu_aug1.0_4752.1_16503 |
---|---|
Locus | scaffold4752.1 : 72006 ... 78884 : + |
To GenomeBrowser | scaffold4752.1:72006..78884 |
Genes list of scaffold | scaffold4752.1 |
Synonym | NA |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_4752.1_16503.t1 | 2 | 1 | Chitin_bind_3 | 15 | 138 | 2.6e-16 | 60.4 | 8.4e-20 | 6.3e-16 | 59.1 |
pfu_aug1.0_4752.1_16503.t1 | 2 | 2 | Chitin_bind_3 | 192 | 199 | 2.6e-16 | 60.4 | 0.48 | 3600.0 | -2.0 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_4752.1_16503.t1 | gi|242023172|ref|XP_002432010.1| | conserved hypothetical protein [Pediculus humanus corporis] | 2.0e-29 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
>Adult tissues | |
Dshape | 1 |
Transcript
Transcript ID | pfu_aug1.0_4752.1_16503.t1 |
---|---|
Definition | - |
>pfu_aug1.0_4752.1_16503.t1 atgccacgcccccatgaagatggcggggaattcggacaggggtacgtggcaggagattacacggcgggggatgtgatcaa tattgtagtgaacattacagccaatcattacggctggtttgagttaagactttgtccccaggtcgatccttcacgccctt tgacccaggattgccttgacaacaacctcttgaccttgtttgaatcagattctccccattcaacaggaatgactcggtat taccttggggaagggagaggaacaatcaatgtaacatcaaagttacctgatgacatcacgtgtgaaaagtgcgtccttca gtggaagtacaaagcaggtaacagttggggctgtgacaaggaatgctgtataggctgcggaaaccaggagcatttctata attgtgctgacatacggatacatccacccgggggcacaaatcataacataatgagaaacgttctcaacccaaatatacaa caatctaatagtgatgatcatcaaaggatacgttactatgacgacgaggatttagaatcagcagatttgaacactgactc taacaaaaagagaccaaatgattatgatcatcagcatcaagaggaaatgataaaacttgactcaaaacaacaaggcaaac tagccgagtccaaaatattgtcttcattttctagaattcaatggaaagacttaaaggaaaacgaatcgtttgatatcata gatgacttgaggaatattccggaagtcaaacaagtcctgacatgcgtaccggctcctagatggataaaggtcaagggcat gcttcagtggtgtaaatggaattgtcccaaatgtccaaagtcccattgtatatgttatgaaatgaaataa |
Protein
Protein ID | pfu_aug1.0_4752.1_16503.t1 |
---|---|
Definition | - |
>pfu_aug1.0_4752.1_16503.t1 MPRPHEDGGEFGQGYVAGDYTAGDVINIVVNITANHYGWFELRLCPQVDPSRPLTQDCLDNNLLTLFESDSPHSTGMTRY YLGEGRGTINVTSKLPDDITCEKCVLQWKYKAGNSWGCDKECCIGCGNQEHFYNCADIRIHPPGGTNHNIMRNVLNPNIQ QSNSDDHQRIRYYDDEDLESADLNTDSNKKRPNDYDHQHQEEMIKLDSKQQGKLAESKILSSFSRIQWKDLKENESFDII DDLRNIPEVKQVLTCVPAPRWIKVKGMLQWCKWNCPKCPKSHCICYEMK |