Gene
Gene Model ID | pfu_aug1.0_5215.1_45141 |
---|---|
Locus | scaffold5215.1 : 57278 ... 59965 : - |
To GenomeBrowser | scaffold5215.1:57278..59965 |
Genes list of scaffold | scaffold5215.1 |
Synonym | NA |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_5215.1_45141.t1 | 1 | 1 | RVT_1 | 6 | 92 | 2.1e-14 | 53.4 | 5.3e-18 | 3.9e-14 | 52.5 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_5215.1_45141.t1 | gi|115908699|ref|XP_780253.2| | 2.0e-33 |
Transcript
Transcript ID | pfu_aug1.0_5215.1_45141.t1 |
---|---|
Definition | - |
>pfu_aug1.0_5215.1_45141.t1 atgggtaatacacattctcaactcaaagcaatttcatgtggcgtcccacagggatcggtactcggtccactcttgtttct tatttatattaatgacttgcccctccacgtcaaatcatccagtttgagtctgtttgctgatgatgcaactctacataagt cagcaccttctgtagacttcgtcaagttgccactttcctcggatgttgataatgtaaataaatggtgccgggaaaatggt atgatcgttaatgaaaacaaaagtaaatgtatggtgattgctacttctcaaaaactttcaaaactacaaccaaatgcatt agcgatttatgtcaatggaaacacactcgaacacattgactgtgagaagttactgggagttcatatagacccttccttac aattcaataaacatgttgaccatgtatgtcgatctattacaccaaaaattgcctcattaagaaaaataaagcgatacctt cctctttcgtacagaaaactttactataacgcgtatattctcccatgcatagagtctgcctattgtttaacaatgtgggg aaatgcatccaaaattcatatggaaagaatccacaaattgcaaaaatgcgtcgcacgtattattctggatgcgccacctg acgcgccatcgctaccactctttactgaattgggttggctgactgttttcgaaagggtcgagttcaataagggtattctt ctgtacaaagctatacataatatgtgcccagaatacataacagatatgtttaaatttcagtcgtcttcgtatggcttgcg gtcctcgtcaaatcagcaaatgtctattccgaaacacaataacgagcttttcaaaaaatcttttcagtattctggagcaa ttatatggaataatctccccttgaacattagactggcctctaccctcggaacattcaagcataaactacataagtatata gtttcaaagcgataa |
Protein
Protein ID | pfu_aug1.0_5215.1_45141.t1 |
---|---|
Definition | - |
>pfu_aug1.0_5215.1_45141.t1 MGNTHSQLKAISCGVPQGSVLGPLLFLIYINDLPLHVKSSSLSLFADDATLHKSAPSVDFVKLPLSSDVDNVNKWCRENG MIVNENKSKCMVIATSQKLSKLQPNALAIYVNGNTLEHIDCEKLLGVHIDPSLQFNKHVDHVCRSITPKIASLRKIKRYL PLSYRKLYYNAYILPCIESAYCLTMWGNASKIHMERIHKLQKCVARIILDAPPDAPSLPLFTELGWLTVFERVEFNKGIL LYKAIHNMCPEYITDMFKFQSSSYGLRSSSNQQMSIPKHNNELFKKSFQYSGAIIWNNLPLNIRLASTLGTFKHKLHKYI VSKR |