Gene
Gene Model ID | pfu_aug1.0_5662.1_23856 |
---|---|
Locus | scaffold5662.1 : 16336 ... 22815 : - |
To GenomeBrowser | scaffold5662.1:16336..22815 |
Genes list of scaffold | scaffold5662.1 |
Synonym | pfu_aug2.0_528.1_27507 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_5662.1_23856.t1 | 3 | 1 | MFS_1 | 253 | 384 | 5.7e-09 | 35.1 | 5.3e-09 | 3.9e-05 | 22.5 |
pfu_aug1.0_5662.1_23856.t1 | 3 | 1 | UNC-93 | 263 | 372 | 1.3e-11 | 44.2 | 1.7e-15 | 1.3e-11 | 44.2 |
pfu_aug1.0_5662.1_23856.t1 | 3 | 2 | UNC-93 | 389 | 423 | 1.3e-11 | 44.2 | 0.28 | 2100.0 | -1.9 |
pfu_aug1.0_5662.1_23856.t1 | 3 | 2 | MFS_1 | 465 | 651 | 5.7e-09 | 35.1 | 1.9e-08 | 0.00014 | 20.7 |
pfu_aug1.0_5662.1_23856.t1 | 3 | 3 | UNC-93 | 503 | 538 | 1.3e-11 | 44.2 | 0.012 | 92.0 | 2.4 |
pfu_aug1.0_5662.1_23856.t1 | 3 | 3 | MFS_1 | 656 | 689 | 5.7e-09 | 35.1 | 0.015 | 110.0 | 1.3 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_5662.1_23856.t1 | gi|242023985|ref|XP_002432411.1| | conserved hypothetical protein [Pediculus humanus corporis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
>Adult tissues | |
adductorMuscle | 1 |
Transcript
Transcript ID | pfu_aug1.0_5662.1_23856.t1 |
---|---|
Definition | - |
>pfu_aug1.0_5662.1_23856.t1 atggaggatgagcagcaaattaagatcgtaatctcagagcatgacaacgaacaaacgctgaaagaaacaaaggcaaaatc acaaagttctctgagcatagattctgcctacattgaacaagctgcgttgattatgaacaatgaaaccgaaatgaataacg agtgtgaacaatgcttgaatttgaaagccgatctaaacaaaagtcgagatagtttcgattctgcttatactgactctatt acaagtaatgacagtagaacggccttactgaagaagcaactcgaggatgacactggaaatgacgacgaaaatggaaatga cgaagctccaggaactgacggtttaacggaacatattcttaaagatcatgacgacttaccaatgtcagcaaaaagctcat tttgggacataacagactttggtcatgaaattgaggccaaagctaatcgaccacgaatgaacactcttacgcagttgacc gaaagtgcggcatacattgatgatatgtcatgcccaagtcccggtgtcagaaggttaagaagcgcgtgcaaaaacgctgt tatgaatctcagccaagaaatggtattcaaatcaatgtcagttttagaaatagacaaacaaggaataaaagcgccagatc ctgatatggaagttgaaatcgaagaaatcggtttcatcaataaccacatgagaaatttgatcgttcttagcgtgggaata gctctcacaaacaccgccatagggtcgctgagaaacttgcaaagcagtctgaaccacgatggtggtataggtctctactc cctagccgccagtttcttgtctttcacgattttcagtctactaaccccatttatcgtcctcaaattccgaccaaagagat gtctgatcttcagtttgttcactcagctcgtgtacgtgatcgggaacctgcaacccacatttcttgtgttcatacccgcg tctttcctacagggactcggaaacgccctcctatggaattcgatgagtacctacgtcacctacctcgcacgtgcctcggc actcaaaaataacgagcagaccgtacatgtcgcaagcaagtttttcggcattttcttctttttctatcaattctcggttg tgctagggaatttgatctcatcattagtcctcctgtttggtcaggatatcgtgtctcattctcataaccattctacctca acaatggacgtccaagtatcgtataactcaagttccgtagcgcatgcgcataatatgacgtcatcgatttctagtcacag tgatcaccattttgaactttgtggcgcgaaatactgccactcatacaagcttgatcactcaagcatggatgtcgacgaag acaccaagtacctgctgttgggattatacggcatgtgcatggtatttgccgtggttggttgtgcctatctgctggaccct gtgaagacatacgttgcatcaacctctagctgtggacagattatcactcagatttcctcggtgctgaaatgcatccttga caagaggttcctattgatttgtggacttttgatgtactcaaccatgcagttagcattcgtcacggctgaagtaacaaagg cttttgtcacgtgtcctgtgggaatcttcatggtcggctactgcatgatcgtgtatggtgtatgtggtggaacgacgtca ttcattggtggaagattgacgaaatacatcggaagaattccactcatagttgcagctgccataagtaacctgggtctact tgcttttatggtattttggagaccagactcggatcagatagttgccttcttactcctgatgggagcatggggtctaggcg atggcatatggctctcccaagttaattgtatcatcagcgctattttccctgagaaactggaagaagcatttgcagcctca cgaactctccaaggtttgggtggggctattgtcatggggtatgccacccaactctgcatgataagtaaaatgggtatcct cgctggagcctgcattttcggcactagtatgtacatcgtcgccgaaatgatatcaagacgaaaacaagataacattgatg aggagaaatcactcaccaaagcttga |
Protein
Protein ID | pfu_aug1.0_5662.1_23856.t1 |
---|---|
Definition | - |
>pfu_aug1.0_5662.1_23856.t1 MEDEQQIKIVISEHDNEQTLKETKAKSQSSLSIDSAYIEQAALIMNNETEMNNECEQCLNLKADLNKSRDSFDSAYTDSI TSNDSRTALLKKQLEDDTGNDDENGNDEAPGTDGLTEHILKDHDDLPMSAKSSFWDITDFGHEIEAKANRPRMNTLTQLT ESAAYIDDMSCPSPGVRRLRSACKNAVMNLSQEMVFKSMSVLEIDKQGIKAPDPDMEVEIEEIGFINNHMRNLIVLSVGI ALTNTAIGSLRNLQSSLNHDGGIGLYSLAASFLSFTIFSLLTPFIVLKFRPKRCLIFSLFTQLVYVIGNLQPTFLVFIPA SFLQGLGNALLWNSMSTYVTYLARASALKNNEQTVHVASKFFGIFFFFYQFSVVLGNLISSLVLLFGQDIVSHSHNHSTS TMDVQVSYNSSSVAHAHNMTSSISSHSDHHFELCGAKYCHSYKLDHSSMDVDEDTKYLLLGLYGMCMVFAVVGCAYLLDP VKTYVASTSSCGQIITQISSVLKCILDKRFLLICGLLMYSTMQLAFVTAEVTKAFVTCPVGIFMVGYCMIVYGVCGGTTS FIGGRLTKYIGRIPLIVAAAISNLGLLAFMVFWRPDSDQIVAFLLLMGAWGLGDGIWLSQVNCIISAIFPEKLEEAFAAS RTLQGLGGAIVMGYATQLCMISKMGILAGACIFGTSMYIVAEMISRRKQDNIDEEKSLTKA |