Gene
Gene Model ID | pfu_aug1.0_5704.1_67299 |
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Locus | scaffold5704.1 : 1 ... 4079 : + |
To GenomeBrowser | scaffold5704.1:1..4079 |
Genes list of scaffold | scaffold5704.1 |
Synonym | pfu_aug2.0_4692.1_09366 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_5704.1_67299.t1 | 1 | 1 | YqaJ | 70 | 224 | 7.5e-19 | 68.2 | 1.6e-22 | 1.2e-18 | 67.5 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_5704.1_67299.t1 | gi|260787579|ref|XP_002588830.1| | hypothetical protein BRAFLDRAFT_89736 [Branchiostoma floridae] | 2.0e-28 |
Transcript
Transcript ID | pfu_aug1.0_5704.1_67299.t1 |
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Definition | - |
>pfu_aug1.0_5704.1_67299.t1 ccaaaagaaaagcggaaagtgcatcaaaatgtaacagcaaaaaagctagaaaggaatatggaaatgactgtttagatggg actccagatatttctactgaagaactatcaactgctaaaacagagtacatagcatctgagataaatatttcttcttcaag aattaaagaaatcgaaaaaacaactaaaagtcagtcattctcagcaacatggatcagagagaggaagaaaagactaacat catctaactttggagacgtcatcaggaaaagtactacagcaaaagcagcaccctacatttcaagactcatgtattcaaag ttctcagggaataagtacaccagaaaaggaattcagtctgagggagtgacaataaaggaatacacacgacttaaaagcaa ggacgacatcacagtgacagttaagccttcaggtctgattatcgacgagaatcataagtttttagcagccagccctgatg gtgtggtagaggaagatgagagtactggacttctagaaattaagaaccttcttcagaacaaccaggcatcatttgaggaa gctgctagaaagagtacattttgtttagaatccaataaaggaaaattgacacttaaacgcaatcataattattattacca gtgccaaggacaattaaacatatgtcaaatagaatggctggatttcattgtaagacgcaccaatccatacgaaattcatg ttgaaagaatttatagagacaaaaaattatgggatgacttcatggtgccaaagttgacagctttttatcataactgtatg ctgccagagcttgcatccccgagaaagaacacattgcaaggaataagagaaccttcaaaaccatgggtaggtgtattttt atcatag |
Protein
Protein ID | pfu_aug1.0_5704.1_67299.t1 |
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Definition | - |
>pfu_aug1.0_5704.1_67299.t1 KRKAESASKCNSKKARKEYGNDCLDGTPDISTEELSTAKTEYIASEINISSSRIKEIEKTTKSQSFSATWIRERKKRLTS SNFGDVIRKSTTAKAAPYISRLMYSKFSGNKYTRKGIQSEGVTIKEYTRLKSKDDITVTVKPSGLIIDENHKFLAASPDG VVEEDESTGLLEIKNLLQNNQASFEEAARKSTFCLESNKGKLTLKRNHNYYYQCQGQLNICQIEWLDFIVRRTNPYEIHV ERIYRDKKLWDDFMVPKLTAFYHNCMLPELASPRKNTLQGIREPSKPWVGVFLS |