Gene
Gene Model ID | pfu_aug1.0_5704.1_67301 |
---|---|
Locus | scaffold5704.1 : 19206 ... 25933 : + |
To GenomeBrowser | scaffold5704.1:19206..25933 |
Genes list of scaffold | scaffold5704.1 |
Synonym | pfu_aug2.0_801.1_04585 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_5704.1_67301.t1 | 2 | 1 | MFS_1 | 13 | 388 | 8.1e-23 | 80.7 | 6.5e-26 | 8.1e-23 | 80.7 |
pfu_aug1.0_5704.1_67301.t1 | 2 | 2 | MFS_1 | 375 | 427 | 8.1e-23 | 80.7 | 0.0069 | 8.6 | 4.9 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_5704.1_67301.t1 | gi|295444876|ref|NP_659070.2| | sodium-dependent glucose transporter 1A [Mus musculus] | 2.0e-29 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
>Adult tissues |
Transcript
Transcript ID | pfu_aug1.0_5704.1_67301.t1 |
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Definition | - |
>pfu_aug1.0_5704.1_67301.t1 atggctggtcaagctgggccgtccttccttgacctacagctcattaccaacgtctccctagatcgtggttcagccttctt tacggctggcggcgtaggctacctttccggttcactggttacggggtacgtgttcgataaaataaaggacaaagtgttca ttgtgttcatcagtttggttggaatgggcttgacaacggctgctataccgttttgttatatttatgaactaatggtgttc gttcagctagtcagaggcatcactgctgggggtcttgatacaagtggaaatacattactttcaaggacttggggtaaaca aggacgcatgtttatgcaggcattacatttcggatttgcgttcggtggttcattgtcccctttggctattgctccttttc taagcgagcaaaattcagtagatgtctcagacggaaaagggaattcaaaaacctccgtgttcaacgtcagctcaacattg tataatgctacgaatgattcctatggatccaacttaacactatttggcgattcaagcagtgggtcaactttatacatagc gtactcgatcactgccttcatgtgcattgtttgtgccattccagctttcatcattttcgttcaaaatcgacgaagaagaa agcatgaaaagaagagaaaacgggaacaaaacatagaatcggacgaagaaaaggaggaaaaacatcatgtcaaaatgact agaaacatgaaaataattgtaattattaatttggtacttattttcatgttttattgtgctgtggaggactcttacatttc ctttttatccacgttttgtgtcagagagttaaagtggacaaaagtcaagggtgctgtcgtcacttccgttctctggacag cttttgctgtaggcagattggcggggattttcctggttgtcatattttccccttcaacattaatctttattcatgcttca cttgagcttgcatcactgattgcaatttttgtgtctgtaactttcgaatttagtttaggtatgtggatatttagcccgat tctcggattcgccatgtcagttatctttccctgtatttttacatggacggaggtttccttcatgccagtgactgggagac tttcctccttattcctggttgtggcttgcacagcttcctccattaatcccataattcttggtgagataatggacaaattt tctaatctatggttcgtttatttgttgacaggcgaagctgtccttctttatgtctttttaatcattgcattctatatatc aagaaaagttttacgatcgaaacctgcatcttctgaaataacagtagaggcgagttaa |
Protein
Protein ID | pfu_aug1.0_5704.1_67301.t1 |
---|---|
Definition | - |
>pfu_aug1.0_5704.1_67301.t1 MAGQAGPSFLDLQLITNVSLDRGSAFFTAGGVGYLSGSLVTGYVFDKIKDKVFIVFISLVGMGLTTAAIPFCYIYELMVF VQLVRGITAGGLDTSGNTLLSRTWGKQGRMFMQALHFGFAFGGSLSPLAIAPFLSEQNSVDVSDGKGNSKTSVFNVSSTL YNATNDSYGSNLTLFGDSSSGSTLYIAYSITAFMCIVCAIPAFIIFVQNRRRRKHEKKRKREQNIESDEEKEEKHHVKMT RNMKIIVIINLVLIFMFYCAVEDSYISFLSTFCVRELKWTKVKGAVVTSVLWTAFAVGRLAGIFLVVIFSPSTLIFIHAS LELASLIAIFVSVTFEFSLGMWIFSPILGFAMSVIFPCIFTWTEVSFMPVTGRLSSLFLVVACTASSINPIILGEIMDKF SNLWFVYLLTGEAVLLYVFLIIAFYISRKVLRSKPASSEITVEAS |