Gene
Gene Model ID | pfu_aug1.0_5795.1_16774 |
---|---|
Locus | scaffold5795.1 : 15597 ... 23135 : - |
To GenomeBrowser | scaffold5795.1:15597..23135 |
Genes list of scaffold | scaffold5795.1 |
Synonym | pfu_aug2.0_35.1_16754 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_5795.1_16774.t1 | 2 | 1 | Y_phosphatase | 20 | 36 | 0.0 | 208.1 | 0.0029 | 42.0 | 3.3 |
pfu_aug1.0_5795.1_16774.t1 | 2 | 2 | Y_phosphatase | 97 | 331 | 0.0 | 208.1 | 0.0 | 0.0 | 203.1 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_5795.1_16774.t1 | gi|32456|emb|CAA41226.1| | protein-tyrosine phosphatase [Homo sapiens] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
>Adult tissues | |
adductorMuscle | 1 |
Transcript
Transcript ID | pfu_aug1.0_5795.1_16774.t1 |
---|---|
Definition | - |
>pfu_aug1.0_5795.1_16774.t1 atgaacagaaaaacgacacgtgttatcgacaaccacaacaaaagtgaatgtcatagacaagtccgggaaaaagaacagta catatttgtatatgacgtgctgttggaggccctgatttgcggggagacaaccgtgtcagtagacgcttacagggatatcc tggatgacttactacagtacgaccaaagtatagccaaaacaaaaatagaggaacaatatgaggttttgaatctaataacg tccataatagagcgggatgagacaacgacgggactacgccctgaaaatgtcttcaaaaacagaaacaaaacaattgtacc tgcaaacagatgccgaccatatctgataacacccgtggaagattacaacaactatatcaacgctgtatttctggatagtt tccggcggaaggacgcttacatcattacccagatgccacttccgctgacagctgtagatttctggcggctaatttatgac cacaattcatactgtattgtcatgctgaacgaagtagacaaagctgacgagacttgtgtagcatactggacgctggacac atgtggagagagcttcggtccattcatagtagagaccacagcagaaatcaaatcagaccccagtgttactgtcagggact tcactatcacaaatacactcaatcctcaggaaatgccacgagttgtccgtcagtttaacttccaccgttggacagagggc agtgcagtccccagctctaaggcggctctcctggagttactagacaacgtgggtaaatggcagggtcagagtggaaacaa gcctgtcacagtccactgcctggatggagcagcaaagagcggtctgttcgtagcctccagttgtatattagagagagtca agacggagaaagaggtggatgtcttccaaaccatcaaacagatgagactgaatagaccacaactcatagatagcttggaa caattcaagttttgtcatgaaattgccttggaatttttgaactcttcttcacaacccaatggcgcctcctga |
Protein
Protein ID | pfu_aug1.0_5795.1_16774.t1 |
---|---|
Definition | - |
>pfu_aug1.0_5795.1_16774.t1 MNRKTTRVIDNHNKSECHRQVREKEQYIFVYDVLLEALICGETTVSVDAYRDILDDLLQYDQSIAKTKIEEQYEVLNLIT SIIERDETTTGLRPENVFKNRNKTIVPANRCRPYLITPVEDYNNYINAVFLDSFRRKDAYIITQMPLPLTAVDFWRLIYD HNSYCIVMLNEVDKADETCVAYWTLDTCGESFGPFIVETTAEIKSDPSVTVRDFTITNTLNPQEMPRVVRQFNFHRWTEG SAVPSSKAALLELLDNVGKWQGQSGNKPVTVHCLDGAAKSGLFVASSCILERVKTEKEVDVFQTIKQMRLNRPQLIDSLE QFKFCHEIALEFLNSSSQPNGAS |