Gene
Gene Model ID | pfu_aug1.0_585598.1_21872 |
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Locus | scaffold585598.1 : 1 ... 232 : - |
To GenomeBrowser | scaffold585598.1:1..232 |
Genes list of scaffold | scaffold585598.1 |
Synonym | NA |
Manual annotation
Study field | structural proteins |
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Gene name | paramyosin |
Description | Paramyosin partial sequence. BLASTP top hit to AB571843 (Haliotis discus discus). |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_585598.1_21872.t1 | 1 | 1 | ADIP | 8 | 76 | 2.4e-06 | 27.5 | 7.7e-09 | 2.7e-06 | 27.3 |
pfu_aug1.0_585598.1_21872.t1 | 1 | 1 | Myosin_tail_1 | 10 | 76 | 7.2e-18 | 63.7 | 2.3e-20 | 8.1e-18 | 63.5 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_585598.1_21872.t1 | gi|318609972|dbj|BAJ61596.1| | paramyosin [Haliotis discus discus] | 2.0e-19 |
Transcript
Transcript ID | pfu_aug1.0_585598.1_21872.t1 |
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Definition | - |
>pfu_aug1.0_585598.1_21872.t1 tttgaaccattttctgatttccttcaacagcaacgccagaacctccaggtacagttgagtgctttacagagtgactacga caacttgaacgcccgttatgaggaggaatctgaggccgcctccaacctcaggaataccctcagcagagtcaacgctgaat tcgctgctctcaagacaagatacgacaaagaaatcctcgccaagacagaggagatggaagaaatgaggtcag |
Protein
Protein ID | pfu_aug1.0_585598.1_21872.t1 |
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Definition | - |
>pfu_aug1.0_585598.1_21872.t1 FEPFSDFLQQQRQNLQVQLSALQSDYDNLNARYEEESEAASNLRNTLSRVNAEFAALKTRYDKEILAKTEEMEEMRS |