Gene
Gene Model ID | pfu_aug1.0_595.1_65532 |
---|---|
Locus | scaffold595.1 : 946 ... 8424 : + |
To GenomeBrowser | scaffold595.1:946..8424 |
Genes list of scaffold | scaffold595.1 |
Synonym | pfu_aug2.0_2328.1_28760 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_595.1_65532.t1 | 2 | 1 | DNA_pol_B_2 | 838 | 1068 | 1.6e-32 | 112.7 | 1.2e-19 | 8.9e-16 | 57.5 |
pfu_aug1.0_595.1_65532.t1 | 2 | 2 | DNA_pol_B_2 | 1175 | 1503 | 1.6e-32 | 112.7 | 3.6e-18 | 2.7e-14 | 52.7 |
Transcript
Transcript ID | pfu_aug1.0_595.1_65532.t1 |
---|---|
Definition | - |
>pfu_aug1.0_595.1_65532.t1 atgtcttcccggtacttgtctcgtaatcacccctttaaaagggcttctacacttggtttgtgtcacaaaaaacttccagc aatgaaacctcacacagctatggatgcccatgcagatttggatgattttgacgaatggttagccgccatatcagacgaac agttaactaaagaaattgaaaaatggctgcaggagatcaagaccacaacttgtgatgtgtgtttaaaacaatttgaaagc attgaagccttcaatacacataaagaaaccaactgtcatcctcaaaatgagagaatagaagctggtccaaggcaacaagt tgaagcaacagaacaaggaaaccataccaacgagacaaaaggttccgatgcagaggaggatagtggaatctgtgattttg aaaactggttgtccatcataactgaccagcaactgtccactgttattgaaacttcaatacggaatttggaaataataaca tgcgacgtgtgtcaacagcaatttagaaggtctgatgcttatgaaaatcacaaagatcggtgtcaacaatctgataatat tcaaacagagcctaatgatccccaagaagctatggcatcagacaaagaaaccccaaaacagtcaaaaagaactggaaaaa catttcagtgttccaaatgcaaggggaaatttaaaggattccaaaatttccaagagcataaagcaaactgccatcgcgga aaaaaaccttcaantagcatacatctggaggaccaagttatggccgacattctatctcaaaccggatcaactccttccca gattgtggacgagaacgtatctccagccctattccctcctcagcaaagcggtaggggtgtcgatacagatgcctttaaaa cagtgaaacacagggtacgaactttctccaagacaaaagccacagagacaacataccgtgtcaaattcaacacggaatgg cagggtcggaagctgactgatcttcacaaccagttatacgatatgtttgaaaaccttttgaaggaagtcacaaagggata ccaagaagatgatttggggcgtatcgttatacaacacgacagtgtggatcccatcatagtacctttgatgaaattgagag agatgacccttcaatgtataatggagcatattaccaacgtgctgaacagtcaccaggaactctccttagacagctccttc ctgatatcggttggtctaattgcgctaccaaggggcggtactcgactgagggtgaccaaactgagtggtgaggataactc catcgccaaaaaacggtccctcgtacaaattgtcaacgacgataatttgtgcatggccagagccatcgctgtgggatggg cacgtctccatatctgcaccaaagaggaatgggagcaacttacccttaaccgtactgaaaggaatttagaccttatcctt cggcatagagtgcttccacgttcccattacactcatgtccgcacaaaaggatcaagggcacagcgggatttggccgaagc attcacccgaatggtccaccttcccctagacaaacaggcctgcatcacagatatcccaaaatttgaagaagcgcttggtg tgaggatcttagtagttgatggttctatgggcaacagattctgttacatcggatccgaaccacgaggagaaaagagaccc cgtgtatacctgtacctggtagaccagacccattttcataccatcgtctccatgagcggttttttctgtcagtcctactt ttgtgacacatgtctgaaaccatttgccaaactagacaaacatctgtgtgaaggcctgtgcatagtttgtaaggaggaac actgcatccagacagattcccagctgtcctgtcaagattgtcacatgcaatgcagatctttagactgtttcgtccgccac aaagagaaaccctccgagaaggatgacaagatttctcctaggcagacagatgctagtcagtgtcaaaagtactggagatg caccgtctgcaacaaagtagtggacagaacgaacagggatatgacgataaaaccgcacatttgtggtcaatggttttgta acaactgtcaaaaggatgtgatggacggtcaccaatgctacatgcgggcctcattaccgaaagatcaaaacacttcaaaa ttcgtttttttcgactttgagtgtacacaggagacaatgcaccaatgccaagacggttaccatcccctggaaggatcaga cagatgccaaaactgcctggaagccatctgcggtcaaagggagcacatccccaactacgtggtcgtccaacacgtgtgta aaagctgtgaatccaggccaatacgtgaaaagtgcaatgaatgtggaagccggtgcctgtcgtgccaaaggaagagtaaa aagggacgattcctggtacagccctgtgtagatacttgtggtcatcgccagaagaccttttccggatccgaagcatgtgc acagttctgcgaatggcttttccacgaaaggaatcgcggtgccacagtctttgcccacaacatgaaaggctatgacggtg tttttctactgggataccttcttaaaaacagtatcgtcccccagaatctgatctattcgggatccaagataatgtacttt cgtgtacaacgaggactggacattcgggttttggattccttaaactttttccagcttcccctggccagtttgccagcatc atttggtttgagccccgagtcccaggtggaggaggttcttcggaaaggatactttcctcattttttcaacacatccgaga acttcaactacgtgggtccctatcctgatgccgattattatggcgcagattcgatgtctaccaaggacagagcccaattt ctgctgtggttggaggaaaagaaggcggccaatgccactttcgactttgccaaagaaattgatgcctactgtaagagtga cgtcacaatattgagacaggcgtgtctgaaatttcgtcagttgatgaaggagtccaccgccggcatgattgaccctttcg attccgtgacaattgccggcatgtgcctgaacacgttccggacctgttttctccaagaagaatggtctgtagaactagca gagcagacagaccttcccttttctcttagaaacaatgacacagaagtgcagtatgacnggatccgccacgctctgaacca aggcgagtaccacattccagggactcggtatcactgcgatggatattgtcccgagaccaacacagtgtacgagttccttg gatgtcactggcacggttgcaagacctgctaccccagggatcgccataccatcaccatacccggtacggataagacggcg gttgaacttttcaccttgacaaagattcgtgagaaagctatcagggacaaagggtacgggtatgtcagcatatgggaaca cgcatttagagacaagatggccaaggaccctaccatgaagacggttgtaaatagcctggacctggtagacccgatcgacc caagagatagctttttcggagggcggaccaatgccatccggttgcactacaaagtgaaaccgggtgaagaaatccgttat gtggacttcacgagtctctatccgtggactaacaaaacctgccgctatccagtaggtcatcccatggtcgtaaacaaaga ttttaaggatcttcaaaattactttggtatagtgaaatgccaagtgctgccacccaaagacctttttttcccggtgctac ctgttcgggtcaatgggaaactcaagttcccattgtgtaggacctgtgccgcgagggaaacaaatgaccgctgtatccac aacgacaaggagaggagtttcttgggcacctggaccagtattgagctgcaaagagccctagagaaagggtacgacctgtt gaaaatgtaccaagtcttacactggccagagacaactcaataccacccagaaacaaaagaagggggtctattctccattt acatcaacacctttttaaaactaaaacaggaagcttctggatttccaacctggtgtgtggagactttggcggacggtacc attcgccccaaaatagaggaatgcaagaggtacattgagttgtatttcgaaaacgagggaatacgcctggattgggacat ggtcaaaaagaacccaggtttgaggtccctagccaaactgtgcttgaattccctctggggcaaactcggtcaacggggaa atttaccaaggtccaccttctttttcaaagatcagttggacgacttttaccagctcctgacagatgctacaaaagatgtc cagaactttaacatcatgagtgacgatgctgtccacgtgtcgtacaaagacacctcggaatttgtccccgtgagtacaaa taccaacatctacctggcgaccttcaccacctcctgggctcgcctgaaattgtaccacgtgttggatacccttggccgag atgtcttgtaccacgatacggacagcatcatctacatctgtagaccgggtcagaacgaagtgcctcttggagactatttg ggtgagctgacagacgaattggacggtgattacattgtcgaatttgtcagtggaggacccaagaattatgcttaccgcac atccagagggttggaaaaagtgtgcgtgaaaggtttcagtttaaatttccggaattcccaactgatcaatttttcatcca taaaggatttgatgatggatcacggggaagaagacgaaccgagccgcaagaaagcccgcattgagacggtgaacgagcac aaaatcaatcgtgataaatggaagtgtgccgtcttcaaccgatcggagaagaaagcctatcggatcgtgtacacaaaacg ggcattaaacagagatgattggaccaccctcccgtttggttattgcggtgcacagtga |
Protein
Protein ID | pfu_aug1.0_595.1_65532.t1 |
---|---|
Definition | - |
>pfu_aug1.0_595.1_65532.t1 MSSRYLSRNHPFKRASTLGLCHKKLPAMKPHTAMDAHADLDDFDEWLAAISDEQLTKEIEKWLQEIKTTTCDVCLKQFES IEAFNTHKETNCHPQNERIEAGPRQQVEATEQGNHTNETKGSDAEEDSGICDFENWLSIITDQQLSTVIETSIRNLEIIT CDVCQQQFRRSDAYENHKDRCQQSDNIQTEPNDPQEAMASDKETPKQSKRTGKTFQCSKCKGKFKGFQNFQEHKANCHRG KKPSXSIHLEDQVMADILSQTGSTPSQIVDENVSPALFPPQQSGRGVDTDAFKTVKHRVRTFSKTKATETTYRVKFNTEW QGRKLTDLHNQLYDMFENLLKEVTKGYQEDDLGRIVIQHDSVDPIIVPLMKLREMTLQCIMEHITNVLNSHQELSLDSSF LISVGLIALPRGGTRLRVTKLSGEDNSIAKKRSLVQIVNDDNLCMARAIAVGWARLHICTKEEWEQLTLNRTERNLDLIL RHRVLPRSHYTHVRTKGSRAQRDLAEAFTRMVHLPLDKQACITDIPKFEEALGVRILVVDGSMGNRFCYIGSEPRGEKRP RVYLYLVDQTHFHTIVSMSGFFCQSYFCDTCLKPFAKLDKHLCEGLCIVCKEEHCIQTDSQLSCQDCHMQCRSLDCFVRH KEKPSEKDDKISPRQTDASQCQKYWRCTVCNKVVDRTNRDMTIKPHICGQWFCNNCQKDVMDGHQCYMRASLPKDQNTSK FVFFDFECTQETMHQCQDGYHPLEGSDRCQNCLEAICGQREHIPNYVVVQHVCKSCESRPIREKCNECGSRCLSCQRKSK KGRFLVQPCVDTCGHRQKTFSGSEACAQFCEWLFHERNRGATVFAHNMKGYDGVFLLGYLLKNSIVPQNLIYSGSKIMYF RVQRGLDIRVLDSLNFFQLPLASLPASFGLSPESQVEEVLRKGYFPHFFNTSENFNYVGPYPDADYYGADSMSTKDRAQF LLWLEEKKAANATFDFAKEIDAYCKSDVTILRQACLKFRQLMKESTAGMIDPFDSVTIAGMCLNTFRTCFLQEEWSVELA EQTDLPFSLRNNDTEVQYDXIRHALNQGEYHIPGTRYHCDGYCPETNTVYEFLGCHWHGCKTCYPRDRHTITIPGTDKTA VELFTLTKIREKAIRDKGYGYVSIWEHAFRDKMAKDPTMKTVVNSLDLVDPIDPRDSFFGGRTNAIRLHYKVKPGEEIRY VDFTSLYPWTNKTCRYPVGHPMVVNKDFKDLQNYFGIVKCQVLPPKDLFFPVLPVRVNGKLKFPLCRTCAARETNDRCIH NDKERSFLGTWTSIELQRALEKGYDLLKMYQVLHWPETTQYHPETKEGGLFSIYINTFLKLKQEASGFPTWCVETLADGT IRPKIEECKRYIELYFENEGIRLDWDMVKKNPGLRSLAKLCLNSLWGKLGQRGNLPRSTFFFKDQLDDFYQLLTDATKDV QNFNIMSDDAVHVSYKDTSEFVPVSTNTNIYLATFTTSWARLKLYHVLDTLGRDVLYHDTDSIIYICRPGQNEVPLGDYL GELTDELDGDYIVEFVSGGPKNYAYRTSRGLEKVCVKGFSLNFRNSQLINFSSIKDLMMDHGEEDEPSRKKARIETVNEH KINRDKWKCAVFNRSEKKAYRIVYTKRALNRDDWTTLPFGYCGAQ |