Gene
Gene Model ID | pfu_aug1.0_6259.1_52733 |
---|---|
Locus | scaffold6259.1 : 19856 ... 35795 : + |
To GenomeBrowser | scaffold6259.1:19856..35795 |
Genes list of scaffold | scaffold6259.1 |
Synonym | pfu_aug2.0_812.1_07917 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_6259.1_52733.t1 | 2 | 1 | DUF812 | 3 | 126 | 0.0 | 297.0 | 6.5e-32 | 6.4e-29 | 100.9 |
pfu_aug1.0_6259.1_52733.t1 | 2 | 2 | DUF812 | 129 | 246 | 0.0 | 297.0 | 0.0 | 0.0 | 202.5 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_6259.1_52733.t1 | gi|156401085|ref|XP_001639122.1| | predicted protein [Nematostella vectensis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 2 |
>Adult tissues |
Transcript
Transcript ID | pfu_aug1.0_6259.1_52733.t1 |
---|---|
Definition | - |
>pfu_aug1.0_6259.1_52733.t1 atggacatgctggagccagaagaattacaaaaacaaagagaagaagaggtggatgggctaaagcaggatttaaattcagt agcgtcacgtcttgagaatctagacatagacgttaagaagttaacggccggtatacagcaaatggaagaagaaatcacta cacaggcacggcagaatactgataaagaggaagcgtttaaagtcaaaaaacgaactctcgatcttttacctgatgctgaa aataacatagctaaattacagcaagttgtagacagtagtgctcagagacttgtcaagttagcggagcagtgggaaaaaca tagggtacctctcatagaacaattcagggaccttaaagacctcaactctaaaaaagaggcaggagaatatgagaggatga ctaaagacattaacagatcagcttatacaaaaagaattatggaaattgtctccaatatcaaaaaacaaaaagaggaaata gataaggtattggttgataccaaatcaattcagaaggaaattaacagtttgtcggggaaactagacagaacatttactgt aacagatgaacttattttcagggacgctaagaaagatgaggcagccaagaaagcatacagaaatctggctgctctacatg aaaactgtgaggtgttaataaagacagtagaggatacaggtggaataatgagagaaattagggaacttgaggatcagatt gaacatgaaagtaaaaacaaggtgctatcaaacctagaaaagatcacatctgattaccaacagatgaagaaggagaatat ggcattaatggaaaaacttaaaggcaaatcatga |
Protein
Protein ID | pfu_aug1.0_6259.1_52733.t1 |
---|---|
Definition | - |
>pfu_aug1.0_6259.1_52733.t1 MDMLEPEELQKQREEEVDGLKQDLNSVASRLENLDIDVKKLTAGIQQMEEEITTQARQNTDKEEAFKVKKRTLDLLPDAE NNIAKLQQVVDSSAQRLVKLAEQWEKHRVPLIEQFRDLKDLNSKKEAGEYERMTKDINRSAYTKRIMEIVSNIKKQKEEI DKVLVDTKSIQKEINSLSGKLDRTFTVTDELIFRDAKKDEAAKKAYRNLAALHENCEVLIKTVEDTGGIMREIRELEDQI EHESKNKVLSNLEKITSDYQQMKKENMALMEKLKGKS |