Gene
Gene Model ID | pfu_aug1.0_678.1_36648 |
---|---|
Locus | scaffold678.1 : 19806 ... 45815 : - |
To GenomeBrowser | scaffold678.1:19806..45815 |
Genes list of scaffold | scaffold678.1 |
Synonym | NA |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_678.1_36648.t1 | 1 | 1 | C1q | 26 | 125 | 1.4e-14 | 54.1 | 2.6e-18 | 1.9e-14 | 53.7 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_678.1_36648.t1 | gi|73427350|gb|AAZ76258.1| | mantle gene 4 [Pinctada fucata] | 4.0e-28 |
Transcript
Transcript ID | pfu_aug1.0_678.1_36648.t1 |
---|---|
Definition | - |
>pfu_aug1.0_678.1_36648.t1 atgacaatagctcagtgttggtttaatataaacaaaattgaaatggtcgggaaactaattattgtgacgttgacagtttt tgctgtaagtagaggagtgaattgtgagatcccagataaaggtgcagaccttgtctacgataaaacaaattccaataacg gcaactattatgacagcacaacaggcaagtttaaagttcctagagacggtccttatgtcttcgcgtggaatgtcgttacc caggccaaatacagcttgaacgccgttctgtatgtaaatgaaaagaaagtaagcagagcacaagctgacggatcgactgg acctcagaatagctctggatctaacatcatagtgttaaatcttaaagaaggtaaccacgatgagatgttgactgggaact gtaatctaaatgagccactcaacgtcagtggacttcaggttcgcaatcgtcactatggaaattctaatgattttgccttg cctgctcgactttcggaagcaattattcaattttgtgatgcaccagtatcgaatttgaattga |
Protein
Protein ID | pfu_aug1.0_678.1_36648.t1 |
---|---|
Definition | - |
>pfu_aug1.0_678.1_36648.t1 MTIAQCWFNINKIEMVGKLIIVTLTVFAVSRGVNCEIPDKGADLVYDKTNSNNGNYYDSTTGKFKVPRDGPYVFAWNVVT QAKYSLNAVLYVNEKKVSRAQADGSTGPQNSSGSNIIVLNLKEGNHDEMLTGNCNLNEPLNVSGLQVRNRHYGNSNDFAL PARLSEAIIQFCDAPVSNLN |