Gene
Gene Model ID | pfu_aug1.0_7.1_14634 |
---|---|
Locus | scaffold7.1 : 91886 ... 107088 : + |
To GenomeBrowser | scaffold7.1:91886..107088 |
Genes list of scaffold | scaffold7.1 |
Synonym | pfu_aug2.0_340.1_00633 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_7.1_14634.t1 | 1 | 1 | adh_short | 17 | 173 | 3.1e-14 | 53.2 | 2.3e-17 | 5.7e-14 | 52.3 |
pfu_aug1.0_7.1_14634.t1 | 1 | 1 | KR | 18 | 127 | 1.2e-07 | 31.5 | 1.1e-10 | 2.7e-07 | 30.4 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
>Adult tissues | |
mantle | 1 |
Transcript
Transcript ID | pfu_aug1.0_7.1_14634.t1 |
---|---|
Definition | - |
>pfu_aug1.0_7.1_14634.t1 atgggtggaagtagctccttccctatgatttctatccccagagatagggtgtttgttgtgacaggtggaaactcaggaat cggttatgaaacatcaaaatggatagccatgatgggaggtcacgttattatagcttgcagatcggaaataagagcgaaag aggcaattgagaaaatgagggcagatttcgcggaagaaaagagtaaagggaccaaaggcataatcactgagggggagata aacgtggaattcatgcagttagacttagcctcgctttcatctgtgatggcgttcattgaagcttttaaagcgtccggtaa aaaattgcatgtgttgctgtgtaatgcaggactagtgcacgagttagaatttacagaggacgaaaatgagctaatgtttc agactaactacttgggtcacttactgatcaccatcaagcttctacccatcatgcagaattctggggaagacttacggatc gtcaacaactctagcctagctcatggctataccaattttgacatgaacaacattcaaggaaagaaggaaaattttaatgc atgggattattacagcaaatctaaaggatatcagattttacaaatgtataccatgaatagaaaattgcaaagaaagggtg tctctattaactgtatcaaccctgggattgtagaaagtcccttccatcgggcacaccccagaggctggatgtcctgtgca atatcatgttccagtggatgcgggtgcacgaatgcgcagtctgaaggaggcgcagcgctgatagacgccgccgtaaatcc taaatatgaaggcagaggtgacttgtatatatctgaacttaaggtgaaatcaactaaagcttacacaaggaaaagagaaa atcaagaagctttatggaaatactcgatggagaaactcagtaaatatctaaatgaagaggacatggcgatttttgacccc gagaagtga |
Protein
Protein ID | pfu_aug1.0_7.1_14634.t1 |
---|---|
Definition | - |
>pfu_aug1.0_7.1_14634.t1 MGGSSSFPMISIPRDRVFVVTGGNSGIGYETSKWIAMMGGHVIIACRSEIRAKEAIEKMRADFAEEKSKGTKGIITEGEI NVEFMQLDLASLSSVMAFIEAFKASGKKLHVLLCNAGLVHELEFTEDENELMFQTNYLGHLLITIKLLPIMQNSGEDLRI VNNSSLAHGYTNFDMNNIQGKKENFNAWDYYSKSKGYQILQMYTMNRKLQRKGVSINCINPGIVESPFHRAHPRGWMSCA ISCSSGCGCTNAQSEGGAALIDAAVNPKYEGRGDLYISELKVKSTKAYTRKRENQEALWKYSMEKLSKYLNEEDMAIFDP EK |