Gene
Gene Model ID | pfu_aug1.0_7.1_14677 |
---|---|
Locus | scaffold7.1 : 591929 ... 607730 : - |
To GenomeBrowser | scaffold7.1:591929..607730 |
Genes list of scaffold | scaffold7.1 |
Synonym | NA |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_7.1_14677.t1 | 2 | 1 | L27 | 86 | 113 | 6.5e-16 | 57.7 | 1.5e-06 | 0.0055 | 16.3 |
pfu_aug1.0_7.1_14677.t1 | 2 | 2 | L27 | 134 | 175 | 6.5e-16 | 57.7 | 1.4e-13 | 5.0e-10 | 38.9 |
pfu_aug1.0_7.1_14677.t1 | 1 | 1 | SH3_2 | 262 | 320 | 1.8e-06 | 27.3 | 1.0e-09 | 3.9e-06 | 26.2 |
pfu_aug1.0_7.1_14677.t1 | 1 | 1 | SH3_1 | 277 | 315 | 1.5e-06 | 27.5 | 9.3e-10 | 3.4e-06 | 26.3 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_7.1_14677.t1 | gi|260806275|ref|XP_002598010.1| | hypothetical protein BRAFLDRAFT_265353 [Branchiostoma floridae] | 0.0 |
Transcript
Transcript ID | pfu_aug1.0_7.1_14677.t1 |
---|---|
Definition | - |
>pfu_aug1.0_7.1_14677.t1 atgataaaacagcgagaacagatacagagcgaatcaaacgggaggcgaatacggcgtaagaaaaattatttccggtcgct actcgttagttttgcagttcagagtagtttttacactcctttgcaagaaacaaacaaccagaaaaaagaacataaaatgc ctgctgcaagcagtgaacctgaggactcaggattagcttcattagagaaacttaggaatgtattggatgacgtaggggat atagtagatgctgaacatgatgacatcgcgttcctcaaaaagtttctgaaggatcctacgttgaagaaagtcatgaagac tcatgacagacttaaccaaggagatgaccttgaaccatcaacagatgatgctgccgtagaaatggtttccatggcaatcc gcgacctacgacctgtccttgacgagagtgaggacgcacaggagttagaggatattcttacaagtcctcatatgaaggca ttgatggaagcccatgatgatgttgccgacagaaattacggtgacgattatccaccccctaacaagataaaatctccgcc cccaccggtgtttaatgccatctccgatcaagttcggcttgttggaatacgtttgcttcacgtaaacgacatcataaagg aagtgaacggtataccagtatgcactcccgaacacttaatggacgtcatacgttgttccgatggtaacatcactcttaag ataattcctgccattgtagaggagcaccatcattctcagctttacctgaggtcccacatcagttatgacccggccaagga cagactattaccgtgtaaagacgcaggcttaccattcagagacggtgatattttacatgtgttgaacaatgaggacccaa gctggtggcaggcccgtatggtaatgcctgatggtacggacggagatacaggactcatcccatcccagcagctggaagaa aaaagacgggcgtatgtacagccagattacgactactcaaagagcagtttgttatgtggtttgaagaagaggaagcaaaa gaaagtaaaatattccatgaaaaatcacaaagaatgtaggtataatatgtacaggtaa |
Protein
Protein ID | pfu_aug1.0_7.1_14677.t1 |
---|---|
Definition | - |
>pfu_aug1.0_7.1_14677.t1 MIKQREQIQSESNGRRIRRKKNYFRSLLVSFAVQSSFYTPLQETNNQKKEHKMPAASSEPEDSGLASLEKLRNVLDDVGD IVDAEHDDIAFLKKFLKDPTLKKVMKTHDRLNQGDDLEPSTDDAAVEMVSMAIRDLRPVLDESEDAQELEDILTSPHMKA LMEAHDDVADRNYGDDYPPPNKIKSPPPPVFNAISDQVRLVGIRLLHVNDIIKEVNGIPVCTPEHLMDVIRCSDGNITLK IIPAIVEEHHHSQLYLRSHISYDPAKDRLLPCKDAGLPFRDGDILHVLNNEDPSWWQARMVMPDGTDGDTGLIPSQQLEE KRRAYVQPDYDYSKSSLLCGLKKRKQKKVKYSMKNHKECRYNMYR |