Gene
Gene Model ID | pfu_aug1.0_7719.1_09619 |
---|---|
Locus | scaffold7719.1 : 10096 ... 26464 : + |
To GenomeBrowser | scaffold7719.1:10096..26464 |
Genes list of scaffold | scaffold7719.1 |
Synonym | pfu_aug2.0_1955.1_18613 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_7719.1_09619.t1 | 1 | 1 | ClpB_D2-small | 89 | 167 | 4.2e-10 | 39.3 | 2.7e-13 | 1.0e-09 | 38.1 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_7719.1_09619.t1 | gi|307180438|gb|EFN68464.1| | 2.0e-39 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
>Adult tissues | |
maleGonad | 1 |
Transcript
Transcript ID | pfu_aug1.0_7719.1_09619.t1 |
---|---|
Definition | - |
>pfu_aug1.0_7719.1_09619.t1 atggtggagcttcttctacagaatggagctgaccctaatgtggaggatgaatattctaattacctgactgtgggtagaga gaagggcatccatcccttacatggagcagaccctaccatagagaactccaatggtcaccgtgctgtagattacgctaaaa caccctccatgcagtccatgctggaaaaggctgagaaaacaagggcattcaagagagatgaatttctgggaaggataaat gaaatagtttactttctccctttttcaagatctgaactgagtaaattagtgagtaaggagctggaattctgggcaaatca ggctgacaagaagcacaacataaagttacaatgggatcataatgttgtagacatattggcagatggatatgatttacatt acggggccaggtctataaaatatgaggtggagagaagagtcgtgacccagcttgccatggctcatgagaggaagctaatt gataaaggatgtgtcataaaactaacggcctctaacgcggaggacatgacaaaaacggtgaatcaacctgacaaaccagc taccatcaaactacagatactacaaaaaggcaaaaaggaggagtttgtggatattgaccttcacacagataaaaatccat ttgatcttggctttaagtaa |
Protein
Protein ID | pfu_aug1.0_7719.1_09619.t1 |
---|---|
Definition | - |
>pfu_aug1.0_7719.1_09619.t1 MVELLLQNGADPNVEDEYSNYLTVGREKGIHPLHGADPTIENSNGHRAVDYAKTPSMQSMLEKAEKTRAFKRDEFLGRIN EIVYFLPFSRSELSKLVSKELEFWANQADKKHNIKLQWDHNVVDILADGYDLHYGARSIKYEVERRVVTQLAMAHERKLI DKGCVIKLTASNAEDMTKTVNQPDKPATIKLQILQKGKKEEFVDIDLHTDKNPFDLGFK |