Gene
Gene Model ID | pfu_aug1.0_7813.1_31464 |
---|---|
Locus | scaffold7813.1 : 46428 ... 63374 : - |
To GenomeBrowser | scaffold7813.1:46428..63374 |
Genes list of scaffold | scaffold7813.1 |
Synonym | pfu_aug2.0_10.1_00023 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_7813.1_31464.t1 | 1 | 1 | Porphobil_deam | 35 | 206 | 0.0 | 218.3 | 0.0 | 0.0 | 217.9 |
pfu_aug1.0_7813.1_31464.t1 | 1 | 1 | Porphobil_deamC | 215 | 254 | 7.5e-08 | 32.3 | 2.7e-11 | 2.0e-07 | 31.0 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_7813.1_31464.t1 | gi|312964492|gb|ADR30032.1| | porphobilinogen deaminase [Ovis aries] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
egg-Dshape | 1 |
>Adult tissues | |
Dshape | 1 |
Transcript
Transcript ID | pfu_aug1.0_7813.1_31464.t1 |
---|---|
Definition | - |
>pfu_aug1.0_7813.1_31464.t1 ttggcgatggttcagacaaatacaataatcagagcaataaaggaacaccatccaaatgtcgaatttcaaatcggatcaac tacaaacgcaacccgacaaaactcgcaagatttcgattgaataatataggagagacaagtgtatttacaagggagctgga agttgctttactggagaaggaggtggatatggtggtgcactccttcaaagatctgcctgctaaactccccgatggtctgg tggttggatgtgtttatactcgagacagcccatatgacgtcatcgccatgcattctaaataccagggaaaaacattacag gacttgccgccaaacagtgtaattggaacaagttctctcagaagaatggctcagattgcgcggaaatacccccatttaaa gtttgaaaacattagaggcaatttgaacactcgattccagaagttagatgagggtgataaatactcagcccttatacttg ctgaagcaggactcgttcgaatgggatgggagaacagaatctcagagaaactacattcagacgtgtgtatgtacgcagta tgtcagggtgctatcggagttgagtgcttggagggagactcgaacactctgcgtcttctctcgtgtatccatgatccaaa gtccgcactggaatgtatagccgaaaggtccttcttcaaacagctggatgtcggctacaaagttccagtatctgtacata cagaagtaacaaaagataagatacaactatctggtggagtattcaggtattcagctctcctgagcgaagcgctgtccgtc gtccgggcgtcatccggcataaactttttacattttcgacctctcctctgctaccgttcactgaatttcaccaagccttc caggaagcaagtagtcaaagtcctctgcaagatatgtgtttttcgtgccgatcggtcaacaaatatagccaccaagggct ctggttggctgacacattttcgacttttcctctgcaaccgctgcacagagaatttgttatatcgttatattagtatcata attcattttctttttacagcttag |
Protein
Protein ID | pfu_aug1.0_7813.1_31464.t1 |
---|---|
Definition | - |
>pfu_aug1.0_7813.1_31464.t1 GDGSDKYNNQSNKGTPSKCRISNRINYKRNPTKLARFRLNNIGETSVFTRELEVALLEKEVDMVVHSFKDLPAKLPDGLV VGCVYTRDSPYDVIAMHSKYQGKTLQDLPPNSVIGTSSLRRMAQIARKYPHLKFENIRGNLNTRFQKLDEGDKYSALILA EAGLVRMGWENRISEKLHSDVCMYAVCQGAIGVECLEGDSNTLRLLSCIHDPKSALECIAERSFFKQLDVGYKVPVSVHT EVTKDKIQLSGGVFRYSALLSEALSVVRASSGINFLHFRPLLCYRSLNFTKPSRKQVVKVLCKICVFRADRSTNIATKGS GWLTHFRLFLCNRCTENLLYRYISIIIHFLFTA |