Gene
Gene Model ID | pfu_aug1.0_8.1_00057 |
---|---|
Locus | scaffold8.1 : 235745 ... 249930 : - |
To GenomeBrowser | scaffold8.1:235745..249930 |
Genes list of scaffold | scaffold8.1 |
Synonym | NA |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_8.1_00057.t1 | 1 | 1 | PI3_PI4_kinase | 212 | 426 | 3.2e-36 | 124.9 | 7.6e-40 | 5.6e-36 | 124.1 |
pfu_aug1.0_8.1_00057.t1 | 1 | 1 | FATC | 509 | 540 | 5.4e-13 | 48.1 | 1.7e-16 | 1.3e-12 | 46.9 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_8.1_00057.t1 | gi|196000550|ref|XP_002110143.1| | hypothetical protein TRIADDRAFT_20924 [Trichoplax adhaerens] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
>Adult tissues |
Transcript
Transcript ID | pfu_aug1.0_8.1_00057.t1 |
---|---|
Definition | - |
>pfu_aug1.0_8.1_00057.t1 ttgataggaaagttgatacagcatggttatgatatgatcaagtcgagtctgagttacgagggtaaatccacggctgcctg tcgttatggtatggaggaggcgtacctagctgtagcaacttactgtaacagattcctcaggatgcaggaagacgctatag ctactttatgcattgtttcttccattaaactaacaaggatggtcaaggctgcagaggtgccaagctggatgtttataatg tggatcagtcagatgatggcactcttagacaaaccccatgctgctgctgtgcataacatagtgtcaaatctcgcgaggga atatccacaggattgggcagatgacataaagatcaagcttgccaagaggaaggcagataaaaaggaactgttgacagatt tctacgacatgtataaaaagctggtagatgtcaccactgactcctcccgatctggtcgcgtgacggtgtcacaaacagac agtctgtcagattcaccatccttggtggataaaggcaaatactccaaaaaatttgctgaaagattcaaaaaggatataga aagtggatttggaaaggatggcaaaaaacttgtggatatgacatatagtagtctttcacaagggtatcatgtcattgaca gggtcggtttgatagagtggatgaataacacaatgcctctaaaagattttctgtacagcaacttcacagaagatgaaagt aaagtcttcaaaggaaaacaaggacctaccggtcttcatgttaattggacatctaaattccacaaaaaccaagcattagc ataccatgctatgtaccaaaaatgtacgaggacagaggttactcgggaatttcagttgaaagagagcaaagtaccatggg atctcacaaggagagctttccatcaaatgagcacgtcaccagaggccttccatgtactgaggtgtaagtttgccgtcaca cacgctacgatctgtatatgtcagtatatactgggtataggagatcgccatctgtccaacttcatgatcaatctcaacac cggtgaaatggttggcatagacttcggacatgcatttggttctgctacacagtttttaccgattcctgaattgatgccaa tacgtctgacaaggcagattcgtaacattatgatgccgttacaagtgaaaggtttgatggaatctacgatgatccacacc ctacgagctctccgtaataatcctgacctactactcaacactatggacatctttattaaggagccatcagtcgattggat ggtgaatgcaaataggcagttgatagaaatgggagaaacagaatccgctgatgatgaggactttacatggtatcctatgg agaaagtcaactacgtcaagagaaagctgaggggagaaaatccttgttatataacaagggacgagcttcgacttggtcat tctaagaaagcctgtatcaaatccatggagagtgtgctgatgggagagaagagggtggacactcgagcagatctaccgcg ctataacttgtccgtggaacaacaggtggcagcactgatagatcaagctacagatacaaatatcctgggccgtgtctatg tgggctgggagccatggatgtga |
Protein
Protein ID | pfu_aug1.0_8.1_00057.t1 |
---|---|
Definition | - |
>pfu_aug1.0_8.1_00057.t1 LIGKLIQHGYDMIKSSLSYEGKSTAACRYGMEEAYLAVATYCNRFLRMQEDAIATLCIVSSIKLTRMVKAAEVPSWMFIM WISQMMALLDKPHAAAVHNIVSNLAREYPQDWADDIKIKLAKRKADKKELLTDFYDMYKKLVDVTTDSSRSGRVTVSQTD SLSDSPSLVDKGKYSKKFAERFKKDIESGFGKDGKKLVDMTYSSLSQGYHVIDRVGLIEWMNNTMPLKDFLYSNFTEDES KVFKGKQGPTGLHVNWTSKFHKNQALAYHAMYQKCTRTEVTREFQLKESKVPWDLTRRAFHQMSTSPEAFHVLRCKFAVT HATICICQYILGIGDRHLSNFMINLNTGEMVGIDFGHAFGSATQFLPIPELMPIRLTRQIRNIMMPLQVKGLMESTMIHT LRALRNNPDLLLNTMDIFIKEPSVDWMVNANRQLIEMGETESADDEDFTWYPMEKVNYVKRKLRGENPCYITRDELRLGH SKKACIKSMESVLMGEKRVDTRADLPRYNLSVEQQVAALIDQATDTNILGRVYVGWEPWM |