Gene
Gene Model ID | pfu_aug1.0_808.1_22310 |
---|---|
Locus | scaffold808.1 : 13558 ... 24425 : - |
To GenomeBrowser | scaffold808.1:13558..24425 |
Genes list of scaffold | scaffold808.1 |
Synonym | pfu_aug2.0_925.1_17939 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_808.1_22310.t1 | 1 | 1 | PRELI | 15 | 130 | 8.1e-33 | 113.2 | 1.3e-36 | 9.9e-33 | 112.9 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_808.1_22310.t1 | gi|156374137|ref|XP_001629665.1| | predicted protein [Nematostella vectensis] | 2.0e-30 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
egg-4cell | 1 |
8-16cell | 1 |
egg-Dshape | 1 |
>Adult tissues | |
Dshape | 1 |
Transcript
Transcript ID | pfu_aug1.0_808.1_22310.t1 |
---|---|
Definition | - |
>pfu_aug1.0_808.1_22310.t1 atgaaatattttcaagatatcggcactattaatttcaagtgggatcaagtggccaacgctttttggcaacggtacccaaa tcccttcagcaagcatgtgctaagcgaagacgtcatatcacgtcacgtcgacgacaagaaattattcaccaagcgcttgt tgaaaaagacgaacgtgaagacgggtccagtacagcgagtggtcggtagcgctagtttcactttcgtggttgaagaatca atcgtagatccggtaaagaaaatcatcacgacgtacacccgaaatatcggattgacgaagttcgtttacgtcgacgagaa atgtgtgtataaagtcaatcctaacaattcagattctgtcgtctgcgagaaacaggcttgggtggaatcgccgcggtcgg gatgtatcgttgtgtatcgtttgaatggaagatgtatcgtgatacgtttcgtcaagctactgtatcgcgatatgagtaca aacgatatatcgttacaccactag |
Protein
Protein ID | pfu_aug1.0_808.1_22310.t1 |
---|---|
Definition | - |
>pfu_aug1.0_808.1_22310.t1 MKYFQDIGTINFKWDQVANAFWQRYPNPFSKHVLSEDVISRHVDDKKLFTKRLLKKTNVKTGPVQRVVGSASFTFVVEES IVDPVKKIITTYTRNIGLTKFVYVDEKCVYKVNPNNSDSVVCEKQAWVESPRSGCIVVYRLNGRCIVIRFVKLLYRDMST NDISLHH |