Gene
Gene Model ID | pfu_aug1.0_808.1_22312 |
---|---|
Locus | scaffold808.1 : 50394 ... 59795 : - |
To GenomeBrowser | scaffold808.1:50394..59795 |
Genes list of scaffold | scaffold808.1 |
Synonym | NA |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_808.1_22312.t1 | 1 | 1 | Patatin | 4 | 145 | 5.5e-08 | 32.9 | 1.5e-11 | 7.6e-08 | 32.5 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_808.1_22312.t1 | gi|148223243|ref|NP_001086854.1| | phospholipase A2, group 6 (cytosolic, calcium-independent) [Xenopus laevis] | 0.0 |
Transcript
Transcript ID | pfu_aug1.0_808.1_22312.t1 |
---|---|
Definition | - |
>pfu_aug1.0_808.1_22312.t1 atgatgggtatgtacatgagactgaaggatgaagtcttccaaggaaagaggccttactcctccgagaggtttgaagaatt actaagacaggagatcggtgaaaaaatggtcatgacagatataaagaatccaaaagtgatgctatttggtctgatggctg atcgtttcccggcggagatgcatgtgttccgttcctacgagccgaccgtagttcatgagcctaagactccaatgaagagg aacgacagcactgataagaaaaagaaagataaaaaagacaaagatccggaagagcaatgttttaaaccgttacctcccca tgaacaacttatttggaaggcggtacgttccagtggagcagcaccaacctattttaaggcctctgacgcttttttggacg gcggtcttatatctaacaaccctacattagacgtactgacagaaatacaggagtacaatttggggctcaaacttaagaac agaaaagaggaggttcaggacattggcttggtgctctccctagggacgggaaaacagcctaaagtttatagtggtgcttt tgacgtttacatgccggagggattatcagacgtcactagagtggcacaaggagctaataacctgattaagattcttgttg accagatatcctacgacattcctcttgacacaaacgacgacaaagtattgaccaaactgatgtgggatgcacaagtttac attgtagctaacaaggagaaaataaggaaaattgcggaactaataaatcgctag |
Protein
Protein ID | pfu_aug1.0_808.1_22312.t1 |
---|---|
Definition | - |
>pfu_aug1.0_808.1_22312.t1 MMGMYMRLKDEVFQGKRPYSSERFEELLRQEIGEKMVMTDIKNPKVMLFGLMADRFPAEMHVFRSYEPTVVHEPKTPMKR NDSTDKKKKDKKDKDPEEQCFKPLPPHEQLIWKAVRSSGAAPTYFKASDAFLDGGLISNNPTLDVLTEIQEYNLGLKLKN RKEEVQDIGLVLSLGTGKQPKVYSGAFDVYMPEGLSDVTRVAQGANNLIKILVDQISYDIPLDTNDDKVLTKLMWDAQVY IVANKEKIRKIAELINR |