Gene
Gene Model ID | pfu_aug1.0_812.1_22320 |
---|---|
Locus | scaffold812.1 : 216 ... 18214 : + |
To GenomeBrowser | scaffold812.1:216..18214 |
Genes list of scaffold | scaffold812.1 |
Synonym | pfu_aug2.0_258.1_27128 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_812.1_22320.t1 | 1 | 1 | Adap_comp_sub | 151 | 402 | 0.0 | 248.8 | 0.0 | 0.0 | 248.5 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_812.1_22320.t1 | gi|340727932|ref|XP_003402287.1| | PREDICTED: AP-3 complex subunit mu-1 [Bombus terrestris] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
>Adult tissues | |
maleGonad | 1 |
Transcript
Transcript ID | pfu_aug1.0_812.1_22320.t1 |
---|---|
Definition | - |
>pfu_aug1.0_812.1_22320.t1 atggaaaaacattggaaaagtgtggtacacaaatcaatatgtgactacttctttgaggagcaagggaaggctgccacacc agaggatgtaccccctgttatagccactccacatcattatctgataaacatctacagaagtcaactttattgtgtagcag tggttaccacagaagtacctccattgtttgtcatcgagtttttacacagaatttttgacacatttgaggattactttact gaatgtacagagagcaccctgaaagaacattatgtaattgtatatgagctattagatgagatgttagacaatggtttccc actcgctgtagaatcaaacattctcaaggagctcatacgacctccaaacttactcaggacaattacagataccgttactg gcaagtcaacaagtgtcgggggaatcctacccacgggacagttatctaacgtaccatggagaaggacaggtgtcaaatat acgaataatgaggcttactttgacgttatagaggaaatagatgctataatagacaaggctggttccactgttatagcaga agtccaaggctatattgattgtttgataaagttaacgggcatgccagatctgaccttgacctttgtgaatcccagacttc tggatgacgttagttttcacccctgtgtcagatataaaagatgggagagtgaaaaattattgtccttcgtacctcctgat gggaattttaggttgatgtcttatcacataggttctaacaatatggtagctgttccaatatacattcgtcacaatataca gtacagggaaggcagctctggcagatttgatgtcacaataggaccaaaacagaccatgggaaaatcagtagaaaacatta ccatggaagttcagtttccaaaatccgttttaaacttgaccttgacaccatcacaaggaaagtacacctttgaccccgtg aacaaagttctctcttgggactgtggcaaattagacgtaacgaagttacccagtattaaaggaaatattagtctacaaag tggctcccctataccagagtctaacccaacaatcaacgtacatttcaccatatcacagatggcaatctctggaatcaagg ttaacagactagatatgtatggagagaaatacaagcctttcaaaggagtcaagtacataaccaaagccgggaaattccag ttcagaacgtga |
Protein
Protein ID | pfu_aug1.0_812.1_22320.t1 |
---|---|
Definition | - |
>pfu_aug1.0_812.1_22320.t1 MEKHWKSVVHKSICDYFFEEQGKAATPEDVPPVIATPHHYLINIYRSQLYCVAVVTTEVPPLFVIEFLHRIFDTFEDYFT ECTESTLKEHYVIVYELLDEMLDNGFPLAVESNILKELIRPPNLLRTITDTVTGKSTSVGGILPTGQLSNVPWRRTGVKY TNNEAYFDVIEEIDAIIDKAGSTVIAEVQGYIDCLIKLTGMPDLTLTFVNPRLLDDVSFHPCVRYKRWESEKLLSFVPPD GNFRLMSYHIGSNNMVAVPIYIRHNIQYREGSSGRFDVTIGPKQTMGKSVENITMEVQFPKSVLNLTLTPSQGKYTFDPV NKVLSWDCGKLDVTKLPSIKGNISLQSGSPIPESNPTINVHFTISQMAISGIKVNRLDMYGEKYKPFKGVKYITKAGKFQ FRT |