Gene
Gene Model ID | pfu_aug1.0_812.1_22321 |
---|---|
Locus | scaffold812.1 : 18279 ... 21865 : - |
To GenomeBrowser | scaffold812.1:18279..21865 |
Genes list of scaffold | scaffold812.1 |
Synonym | pfu_aug2.0_258.1_27127 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_812.1_22321.t1 | 3 | 1 | zf-CDGSH | 20 | 53 | 7.3e-17 | 60.9 | 1.2e-15 | 1.7e-11 | 43.7 |
pfu_aug1.0_812.1_22321.t1 | 3 | 2 | zf-CDGSH | 69 | 89 | 7.3e-17 | 60.9 | 4.7e-10 | 7.0e-06 | 25.7 |
pfu_aug1.0_812.1_22321.t1 | 3 | 3 | zf-CDGSH | 108 | 118 | 7.3e-17 | 60.9 | 0.24 | 3500.0 | -2.1 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_812.1_22321.t1 | gi|320162976|gb|EFW39875.1| | 3.0e-34 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
>Adult tissues |
Transcript
Transcript ID | pfu_aug1.0_812.1_22321.t1 |
---|---|
Definition | - |
>pfu_aug1.0_812.1_22321.t1 atgtcaacatcacagtcaaatgaatgtcagcagcaacattatcccgctgtttctatgtatggaccttgtacggttgccaa tttagagcctggccagaccaagttatggtgtgcctgtggtccgagtaaaaaccagccttggtgtgatggttctcacaagg gtaccggtatcagcccattaaaatggacagtaaagaaaaaacagagactgcatcaaatatgtgcgtgtaaatataccaaa gatccgccttactgtgacgctacccacacaaacttgccgtgtcaggtcttagatagacaggagaaatgtccgctaaaatc agacagtcataatactcaaactaagctttgtacaggatgtggatggataccagacttctaa |
Protein
Protein ID | pfu_aug1.0_812.1_22321.t1 |
---|---|
Definition | - |
>pfu_aug1.0_812.1_22321.t1 MSTSQSNECQQQHYPAVSMYGPCTVANLEPGQTKLWCACGPSKNQPWCDGSHKGTGISPLKWTVKKKQRLHQICACKYTK DPPYCDATHTNLPCQVLDRQEKCPLKSDSHNTQTKLCTGCGWIPDF |