Gene
Gene Model ID | pfu_aug1.0_82.1_21957 |
---|---|
Locus | scaffold82.1 : 45927 ... 49875 : - |
To GenomeBrowser | scaffold82.1:45927..49875 |
Genes list of scaffold | scaffold82.1 |
Synonym | pfu_aug2.0_1075.1_18070 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_82.1_21957.t1 | 1 | 1 | FKBP_C | 42 | 131 | 1.6e-31 | 108.1 | 1.9e-34 | 3.5e-31 | 107.0 |
pfu_aug1.0_82.1_21957.t1 | 2 | 1 | EF-hand_1 | 138 | 163 | 2.4e-08 | 32.7 | 9.3e-05 | 0.17 | 11.2 |
pfu_aug1.0_82.1_21957.t1 | 1 | 1 | EF-hand_7 | 139 | 207 | 6.2e-08 | 32.6 | 6.3e-11 | 1.2e-07 | 31.7 |
pfu_aug1.0_82.1_21957.t1 | 2 | 1 | EF-hand_5 | 140 | 161 | 1.3e-07 | 30.6 | 9.8e-05 | 0.18 | 11.1 |
pfu_aug1.0_82.1_21957.t1 | 2 | 2 | EF-hand_1 | 186 | 208 | 2.4e-08 | 32.7 | 2.6e-07 | 0.00048 | 19.2 |
pfu_aug1.0_82.1_21957.t1 | 2 | 2 | EF-hand_5 | 191 | 207 | 1.3e-07 | 30.6 | 1.1e-06 | 0.0021 | 17.3 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_82.1_21957.t1 | gi|195585438|ref|XP_002082488.1| | GD25197 [Drosophila simulans] | 1.0e-34 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
egg-Dshape | 1 |
trochophore | 1 |
>Adult tissues |
Transcript
Transcript ID | pfu_aug1.0_82.1_21957.t1 |
---|---|
Definition | - |
>pfu_aug1.0_82.1_21957.t1 atggatctcagagatatattgaagattttggtatcattctgtgttttatgctccgtactggcacaaactgagaaaaagaa agaagatgtgaaaatagaagttttagctgcaggagactgctccaggaagtcgacatccgggtccttgatgagatgccatt atgttggaaaattgaccaatggaaaggtttttgaagacagttatgaaaaaggaaagccagtccttttccttctgggagca gggcaggtcttaaaaggatgggagagaggactccaggatatgtgtgtgggagaaaaaaggagactcactattcctcccca tctaggatacgggagcaaggagaatggtgaaattccacccaagtctacccttatttatgaaatcgaagttttggacataa aatccgaggaagatttagacgaagtgtttcccagattggacatcaacagcgatggagttctggatatgacagaggttaaa gaacatttactcaatacggagaagttgaagaagcacctgccatttgagctggatgagcagacgagattttacatgataca gacgatgtatcaaatggcggacaaaaacagagatggcggactgagtccagaggagttcaaaattctaacttctctcggaa caaaaatgttaaagaagaaaactgagctttag |
Protein
Protein ID | pfu_aug1.0_82.1_21957.t1 |
---|---|
Definition | - |
>pfu_aug1.0_82.1_21957.t1 MDLRDILKILVSFCVLCSVLAQTEKKKEDVKIEVLAAGDCSRKSTSGSLMRCHYVGKLTNGKVFEDSYEKGKPVLFLLGA GQVLKGWERGLQDMCVGEKRRLTIPPHLGYGSKENGEIPPKSTLIYEIEVLDIKSEEDLDEVFPRLDINSDGVLDMTEVK EHLLNTEKLKKHLPFELDEQTRFYMIQTMYQMADKNRDGGLSPEEFKILTSLGTKMLKKKTEL |