Gene
Gene Model ID | pfu_aug1.0_82.1_21965 |
---|---|
Locus | scaffold82.1 : 180403 ... 227665 : - |
To GenomeBrowser | scaffold82.1:180403..227665 |
Genes list of scaffold | scaffold82.1 |
Synonym | pfu_aug2.0_7033.1_12912 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_82.1_21965.t1 | 2 | 1 | DnaJ | 149 | 160 | 1.4e-15 | 56.8 | 0.91 | 4500.0 | -2.6 |
pfu_aug1.0_82.1_21965.t1 | 2 | 2 | DnaJ | 466 | 522 | 1.4e-15 | 56.8 | 3.6e-19 | 1.8e-15 | 56.4 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_82.1_21965.t1 | gi|340369514|ref|XP_003383293.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 2 |
>Adult tissues |
Transcript
Transcript ID | pfu_aug1.0_82.1_21965.t1 |
---|---|
Definition | - |
>pfu_aug1.0_82.1_21965.t1 atggctattgtcaaaggagctggtctggtaatgaaagccattatagagcctcctggattattgtcatatatggactccac agacgaagtgccgatacatgagacagataagctgcatgtcagagacaatgtgaagcttgcacaggacatccaaaatagaa atcggaaaaacccaaacctggtgatgatcgagaaaaaaattgatgaattccttcaacactggagagctcgaattggtcta cagaaaaacaaacagaccagagaggaggtgcgagaggcattagagaacgagatgagggcatttaacgtggatcgtgagct cggagcaaattgtgtagtaggctggaatcatcaggagtttgaagtaccgtatcactgtctgtctgatgagattaaaatag gtgactactaccttagacttttgttagaggaaggtgaggacgaatcagaggaaactagtgccatcaaaaaatcatatgag tttttcaatgatttgtatcatcgattcctactgacgcccaagatacagatgaagtgtatgtgtctacaggcaatgaccat tgtctatggaaaatgtcacgaagaaattggagctttcaacgatactcgatatattgttggaatgttggaaaggtcctacg ttcgatttgtgcagaccaatgtaatagaagcctcaccagatatgagcagggacagtgagaaggaatggtattatggcaac aaagataaagaaagattagggccgtacagctttgatgagttgctcttgacctttgaccctatcttggtggagaaggtcgc cctagttctattcctggtaatgcaggacaaccccaacatatcacggctttatttaacgggcgtctttttcttcatactca tgtacactgggtccaacgtcctgcccgtggcacgattcctcaaatatactcatatgtctcaggcatttaggtcagacgag aacaaaggttcggacattatgacacgtagtgttctaggtcatatgcttccggaggccatggtttgttacctggagaatta ttccgcagacaaattcgcccagattttcctcggagagtttgatactccagaggctatttggaacagcgagatgaggcgac ttatgatcgagaagatagcgtcacacttggctgatttctcaccgcgcctatacagtaacacacgagccatgtaccagtac tgtcctatacctgtgatacaattcccgcaacttgaaaatgaacttttctgtaatatatattacctgaagcatctctgtga tacaacaaaattccctgattggccgatcaaagacccggtcaaacttttaaaagacattttagaggcatggaagaaagaag tagagaagaaaccacctactatgtctatagaccaagcttatgaagttttaaacttgaagaaaggagttgggggccatgaa gaatcaaagattcgtaaagcatactttaagttggctcaaaaataccatccagacaaaaacccagacggaagggaaatatt tgagcaagtgaacaaagcatatgaattcctatgtagtaaatccaagcttacagaaggcccggatccacaaaacattgtgc tgatcctgagagcccagtccattctcttcaaacggtataaggaagaattggagccgtataaatacgctggctatcccatg ttaatcaaaaccattaagatggaaacacacgatgatgcgctgttctctaaatcggctccgttacttgctgccgcggcaga actggcgtatcacacagtcaactgctcagcattaaatgcagaggagctccgaagggaacaaggaatacagtcattacaag aagcctttgcacgatgtattaacgtcattagtataaccagcaagcctgaagacactgcagttcagccctcgtggtaccag ggatatacgtccctggtggtaccgaatacgattttattacgttttataaactctgagagccatcaaatagaagctttaaa ggaagtatgtaacaatttagctcgtctgtgtgtgagggcgtgtgcacgccttggagggtacctgcccgagagctcaggtc tagccacacccgaaaacgttcctgtgaagaaatcagttacagccatgctcaccccttatctgtccaggaaactagccaat gaaagtccatctgagggtgaatgcgacaaagagtatggagcaacgtttttatttgacattcacgccaaagaactcattgt aggagaaatatttgttagaatctacaatgaacaatcaacattcccattagaggtaagtactagagttgtaacgatagtca ccgacatcgttgctattgtcggcaaaatgaacgataatgccaaaggctttacgatagatctcctggattacctgggaagt caagcacagtatctacactctctgatgatgcttaagaagaacgacacgtctagtcaggcaaagcaggggacacgactctt acacgtagaaatggcattagaggccctccgcaatgtcattaaaaataatccaggtgtagaaatccagtgtataggtcact ttaagttattattctgtctcctacggttagacgactgtgccaaactacaacagtacgctttggaggtagtcaacagcgtt acaaccaatcaggaatgtgtaaacgacatagcagcatcagaagtactgggttatctcctcttggcaatcaacagtctacc aaactgtcagatacttacattggagagtttgtttggtctgatgtccagtacaaagatcgttaaggaagctctcattaaag gtgctccagtctacttactagacttgtttgccaatgcgtcatttccgaacgtccgagagaaaacggcagaacttatggcc aagatgctggcagacaagctggtcggaccgaagctccgtattattctgtctaagttcctgccggggatatttatggacgc catgagagactcaccggaggccagtgttcatatgttcgagggtacacatgaaaatccagagttgatatggaatgacgaat caagagaaaaggtgtcagacacagtcaaaaagctgaaagacaggcattaccttgctcagcgtgacaatgccgacgcccga tggacgctgagtgaagacttcgctgtagtttatacagacgtggagggagaactcacaattggaggggttttcctgcgtct gtttatagccaatcctggatgggtgctacgcaaaccaaaggaattcctcacagaactaatggagaaatgggtccaactga tcaacatgcaaaaccctgattcggccatgttggatcaggttccgtcactcgggtacataccgaaagtctttcatgcaatg agtcacaaaaacaatgccgttacgaagagtgctatccaagttgctcatcaactagctagtaatgaaatatgtatacgcag tatggcccagatagactgtatcggcccgtttaaggttggcatgaaggcccgacgtgatcaaatcgccctggcagcggagg cattgtccaagatgtttgacaagggagaagatgagctagtcgcacaagctataaacacagacctagtcccattcctgctt aagctactagagggtggtttggaggcgctcgataaaccggcagcaactaaagcccagatagttaaggcactcaaggccat gcagcgtagcttccagtatggagagcagttattgtcccccgctttcgcgaaagcgctgggacattaa |
Protein
Protein ID | pfu_aug1.0_82.1_21965.t1 |
---|---|
Definition | - |
>pfu_aug1.0_82.1_21965.t1 MAIVKGAGLVMKAIIEPPGLLSYMDSTDEVPIHETDKLHVRDNVKLAQDIQNRNRKNPNLVMIEKKIDEFLQHWRARIGL QKNKQTREEVREALENEMRAFNVDRELGANCVVGWNHQEFEVPYHCLSDEIKIGDYYLRLLLEEGEDESEETSAIKKSYE FFNDLYHRFLLTPKIQMKCMCLQAMTIVYGKCHEEIGAFNDTRYIVGMLERSYVRFVQTNVIEASPDMSRDSEKEWYYGN KDKERLGPYSFDELLLTFDPILVEKVALVLFLVMQDNPNISRLYLTGVFFFILMYTGSNVLPVARFLKYTHMSQAFRSDE NKGSDIMTRSVLGHMLPEAMVCYLENYSADKFAQIFLGEFDTPEAIWNSEMRRLMIEKIASHLADFSPRLYSNTRAMYQY CPIPVIQFPQLENELFCNIYYLKHLCDTTKFPDWPIKDPVKLLKDILEAWKKEVEKKPPTMSIDQAYEVLNLKKGVGGHE ESKIRKAYFKLAQKYHPDKNPDGREIFEQVNKAYEFLCSKSKLTEGPDPQNIVLILRAQSILFKRYKEELEPYKYAGYPM LIKTIKMETHDDALFSKSAPLLAAAAELAYHTVNCSALNAEELRREQGIQSLQEAFARCINVISITSKPEDTAVQPSWYQ GYTSLVVPNTILLRFINSESHQIEALKEVCNNLARLCVRACARLGGYLPESSGLATPENVPVKKSVTAMLTPYLSRKLAN ESPSEGECDKEYGATFLFDIHAKELIVGEIFVRIYNEQSTFPLEVSTRVVTIVTDIVAIVGKMNDNAKGFTIDLLDYLGS QAQYLHSLMMLKKNDTSSQAKQGTRLLHVEMALEALRNVIKNNPGVEIQCIGHFKLLFCLLRLDDCAKLQQYALEVVNSV TTNQECVNDIAASEVLGYLLLAINSLPNCQILTLESLFGLMSSTKIVKEALIKGAPVYLLDLFANASFPNVREKTAELMA KMLADKLVGPKLRIILSKFLPGIFMDAMRDSPEASVHMFEGTHENPELIWNDESREKVSDTVKKLKDRHYLAQRDNADAR WTLSEDFAVVYTDVEGELTIGGVFLRLFIANPGWVLRKPKEFLTELMEKWVQLINMQNPDSAMLDQVPSLGYIPKVFHAM SHKNNAVTKSAIQVAHQLASNEICIRSMAQIDCIGPFKVGMKARRDQIALAAEALSKMFDKGEDELVAQAINTDLVPFLL KLLEGGLEALDKPAATKAQIVKALKAMQRSFQYGEQLLSPAFAKALGH |