Gene
Gene Model ID | pfu_aug1.0_8253.1_02566 |
---|---|
Locus | scaffold8253.1 : 5742 ... 18495 : - |
To GenomeBrowser | scaffold8253.1:5742..18495 |
Genes list of scaffold | scaffold8253.1 |
Synonym | pfu_aug2.0_132.1_07001 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_8253.1_02566.t1 | 1 | 1 | Alpha_L_fucos | 21 | 360 | 0.0 | 352.8 | 0.0 | 0.0 | 352.4 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 2 |
>Adult tissues | |
Dshape | 1 |
Transcript
Transcript ID | pfu_aug1.0_8253.1_02566.t1 |
---|---|
Definition | - |
>pfu_aug1.0_8253.1_02566.t1 atggcgatgtctttgtccacgatttcgactctggtaggcacatttgcatttctgctcgtcctgtcgtctgcaaagaggta cgagccaaactgggagtctttggacagtaggccaaacccgaaatggtttgacgatgccaaaatcggcatctttataacat gggggatgtacgcggtacctgcctaccaaggcccctggttccagtactggtggcataccggaaggaagaacgagacagag tttatgaaggggaattaccctccaggctggacctacgctgatttcgcgccagattttactacatggttctacgaccccga ttactgggcagacgtctttcaagattcaggaataaagtacacagtatttgtaacgaaacaccacgatggttacactctct ggccctcaaactattcttggaactggaattctatggatgttgggccgaaacgagatcttgtcggagaatttgtgacatca atccggaatcgcacagatattgttgtcggattgtatcattctctgttcgaattctacaatccgttatttctgcaagatca aaagaatggctacaagactcatcaatttgcgaaacaaaaatctatgccggaactgtacgaacttgtgaacacgtacaaac cggaagtgatctggtctgacggggattggatgacaacggacgactattggaatgccacggaatttatagcctggttgttc aacgatagtccagtgaaagacactgttcttgtgaacgacagatggggaaacaatatcaagtgtaagcacggaagctacct gacttgcttcgaccaatataatccaaaggtactccagactaagaaatgggagagcggtatcactgtagatcagtgttggt cgtatagacgggaagcacgggccatcgactatctatctattgatgaaatcatgacacgccttattcaaatagtcagctgt ggaggtaacgtattggtggatattggtccgaataaggacggcatgataccgccgatagaggaagaaagattacgtcagat gggggcgtggcttaaagtcaacggtgacgcaatatataaaaccaaaccatgggtgtatcagaacgacacagaaaacagca atgtctggtttacagtctccaaatatcaggatccccctgtggtttacgcaatgcacctaggatggcccgagaaggacacc attgttctcggttcaccaattacgtcatcatcaacacaagttaccctacttggcgagactgtgcccataaaatggacgtc aggcggcgccactggtctgactatacaggttcccgtcatcataccaactgcagaaaagttgattgcttggacattcgcaa ttaccaatttgaaaaactga |
Protein
Protein ID | pfu_aug1.0_8253.1_02566.t1 |
---|---|
Definition | - |
>pfu_aug1.0_8253.1_02566.t1 MAMSLSTISTLVGTFAFLLVLSSAKRYEPNWESLDSRPNPKWFDDAKIGIFITWGMYAVPAYQGPWFQYWWHTGRKNETE FMKGNYPPGWTYADFAPDFTTWFYDPDYWADVFQDSGIKYTVFVTKHHDGYTLWPSNYSWNWNSMDVGPKRDLVGEFVTS IRNRTDIVVGLYHSLFEFYNPLFLQDQKNGYKTHQFAKQKSMPELYELVNTYKPEVIWSDGDWMTTDDYWNATEFIAWLF NDSPVKDTVLVNDRWGNNIKCKHGSYLTCFDQYNPKVLQTKKWESGITVDQCWSYRREARAIDYLSIDEIMTRLIQIVSC GGNVLVDIGPNKDGMIPPIEEERLRQMGAWLKVNGDAIYKTKPWVYQNDTENSNVWFTVSKYQDPPVVYAMHLGWPEKDT IVLGSPITSSSTQVTLLGETVPIKWTSGGATGLTIQVPVIIPTAEKLIAWTFAITNLKN |