Gene
Gene Model ID | pfu_aug1.0_9193.1_17448 |
---|---|
Locus | scaffold9193.1 : 1 ... 675 : - |
To GenomeBrowser | scaffold9193.1:1..675 |
Genes list of scaffold | scaffold9193.1 |
Synonym | NA |
Manual annotation
Study field | structural proteins |
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Gene name | actin |
Description | Actin partial sequence. BLASTP hit to GU645246(Penaeus japonicus). |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_9193.1_17448.t1 | 1 | 1 | Actin | 4 | 42 | 4.7e-15 | 54.9 | 3.3e-19 | 4.9e-15 | 54.8 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_9193.1_17448.t1 | gi|341899346|gb|EGT55281.1| | hypothetical protein CAEBREN_32825 [Caenorhabditis brenneri] | 7.0e-19 |
Transcript
Transcript ID | pfu_aug1.0_9193.1_17448.t1 |
---|---|
Definition | - |
>pfu_aug1.0_9193.1_17448.t1 atgtgtgacgacgaagttgctgctttagttgttgacaatggctccggaatgtgcaaggccggtttcgccggagacgatgc ccccagggctgtgttcccatccattgtcggaagacccagacatcag |
Protein
Protein ID | pfu_aug1.0_9193.1_17448.t1 |
---|---|
Definition | - |
>pfu_aug1.0_9193.1_17448.t1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ |