Gene
Gene Model ID | pfu_aug1.0_9494.1_24572 |
---|---|
Locus | scaffold9494.1 : 50503 ... 62373 : - |
To GenomeBrowser | scaffold9494.1:50503..62373 |
Genes list of scaffold | scaffold9494.1 |
Synonym | pfu_aug2.0_550.1_00877 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_9494.1_24572.t1 | 1 | 1 | ACOX | 187 | 367 | 0.0 | 183.5 | 0.0 | 0.0 | 182.9 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_9494.1_24572.t1 | gi|156144444|gb|ABU52892.1| | palmitoyl-CoA oxidase [Mytilus galloprovincialis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
>Adult tissues |
Transcript
Transcript ID | pfu_aug1.0_9494.1_24572.t1 |
---|---|
Definition | - |
>pfu_aug1.0_9494.1_24572.t1 gaatagagcttggggacataggacccaaatttggattttttgataacgacaatggttatatgatactcaaggatgtacga attccacgagaaaacatgtttatgaggtattataaggttaaagatgatggaagttttgttcagcctccgaatgctcgtct agcctacggtacaatgatatttattcgctctgccattgtaagcgatgcgggtcgtgccctagcccaagcatgtataatag ccattcgatacagcgcgttacatgcattatctgcgggactaaaggctttcagtacttgggagtgtactgccgcaatagag gtgtgccgaatgtcctgtggcggccatggttactcgcatgccagcggtataccaaaaatttacgtagacgccactccagg atgcacatacgagggtgaaaataccgtcatgatgctacaagtggctagatttttgatgaagatgtataccaatctacaga agggacaggagcttcccagctttgtacaatatatgaccaaatctcttgataccaagtcatgcatgaaggaggaggtagct cccaactgtttggtcatggcctacgaacacagagcatccaggttaattaaggcggcagctgacgccattcaggccatggt tatgtctggtagttcaccacaggaagcctggaacaaaaacactgtaccactcacatgggctgctttggccttctgtcatt tgtttgttgtcaagaacttctttgagatggtagaggatgctaagatggacggacagacaaaggcggcctttatggctcta tgtaaattgtacgctgtgaatggtgtcattacccaccttggagaattcatacaggacggttacctgaacaaccagcaggt gcaatacatacagaagtccctcctggatctgttagcggagatacgacctaacgctgtagccctcgtagacgcgttcgact atcccgatgccatactacagagctgtctgggacgttatgacggacaagtctatcaggctctatacgacttcgccaagtca tcccctctcaatgaaaaagaggtgctagattccttctttgattatgtaaaacctgtgcaacaagagctggaggctatgaa tcaaccaatggcaagactttaa |
Protein
Protein ID | pfu_aug1.0_9494.1_24572.t1 |
---|---|
Definition | - |
>pfu_aug1.0_9494.1_24572.t1 IELGDIGPKFGFFDNDNGYMILKDVRIPRENMFMRYYKVKDDGSFVQPPNARLAYGTMIFIRSAIVSDAGRALAQACIIA IRYSALHALSAGLKAFSTWECTAAIEVCRMSCGGHGYSHASGIPKIYVDATPGCTYEGENTVMMLQVARFLMKMYTNLQK GQELPSFVQYMTKSLDTKSCMKEEVAPNCLVMAYEHRASRLIKAAADAIQAMVMSGSSPQEAWNKNTVPLTWAALAFCHL FVVKNFFEMVEDAKMDGQTKAAFMALCKLYAVNGVITHLGEFIQDGYLNNQQVQYIQKSLLDLLAEIRPNAVALVDAFDY PDAILQSCLGRYDGQVYQALYDFAKSSPLNEKEVLDSFFDYVKPVQQELEAMNQPMARL |