Gene
Gene Model ID | pfu_aug1.1_7452.1_80175 |
---|---|
Locus | scaffold7452.1 : 53961 ... 54722 : + |
To GenomeBrowser | scaffold7452.1:53961..54722 |
Genes list of scaffold | scaffold7452.1 |
Synonym | NA |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.1_7452.1_80175.t1 | 2 | 1 | I-set | 15 | 93 | 3.5e-16 | 58.8 | 3.5e-19 | 1.3e-15 | 57.0 |
pfu_aug1.1_7452.1_80175.t1 | 1 | 1 | fn3 | 98 | 174 | 8.6e-13 | 48.2 | 8.2e-16 | 3.1e-12 | 46.4 |
pfu_aug1.1_7452.1_80175.t1 | 2 | 2 | I-set | 148 | 173 | 3.5e-16 | 58.8 | 0.43 | 1600.0 | -1.0 |
Transcript
Transcript ID | pfu_aug1.1_7452.1_80175.t1 |
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Definition | - |
>pfu_aug1.1_7452.1_80175.t1 gcataccagaccgtcccagtccaccccgcttcccattggttgagaacattcgtgaggattctgtagtgttgtcatggaaa ccacctcttcatgatggaggcagctttattaccggatatgaaatagagaaatgtgaaccaccaatagagaactgggtccg agtgacaaccactaggatgaccttccataacatcacagggctgtcatcagggaaagaatataaattccgtatcatagcag aaaacttctacggaaaaagcgaaccctgtgaaccaacaagtatcgtccaaacagaggatgctgatgcc |
Protein
Protein ID | pfu_aug1.1_7452.1_80175.t1 |
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Definition | - |
>pfu_aug1.1_7452.1_80175.t1 PPKIHLPNRFKEVSTFEKGEPVVIKIPFTGNPKPSVKWLREGEEIKGRNFNMEVTDRHAILTIKEATKENDGPYHLHLEN EMGSDSATITIQINDRPSPPRFPLVENIREDSVVLSWKPPLHDGGSFITGYEIEKCEPPIENWVRVTTTRITGLSSGKEY KFRIIAENFYGKSEPCEPTSIVQTEDADA |