Gene
Gene Model ID | pfu_aug2.0_1418.1_28275 |
---|---|
Locus | scaffold1418.1 : 44381 ... 56815 : - |
To GenomeBrowser | scaffold1418.1:44381..56815 |
Genes list of scaffold | scaffold1418.1 |
Synonym | pfu_aug1.0_2172.1_58809 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_1418.1_28275.t1 | 1 | 1 | HLH | 22 | 65 | 1.0e-05 | 25.1 | 1.7e-09 | 2.5e-05 | 23.8 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_1418.1_28275.t1 | gi|676447419|ref|XP_009051401.1| | hypothetical protein LOTGIDRAFT_228205 [Lottia gigantea] | 4.0e-29 |
pfu_aug2.0_1418.1_28275.t1 | gi|524898797|ref|XP_005105844.1| | PREDICTED: uncharacterized protein LOC101854740 [Aplysia californica] | 1.0e-27 |
pfu_aug2.0_1418.1_28275.t1 | gi|675848498|ref|XP_009009809.1| | hypothetical protein HELRODRAFT_159693 [Helobdella robusta] | 6.0e-08 |
Transcript
Transcript ID | pfu_aug2.0_1418.1_28275.t1 |
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Definition | - |
>pfu_aug2.0_1418.1_28275.t1 atgaagaccatgccaaaaggatcagtaccaatgcgcatccgtcggcgccagtcagatgccaaatggagagccagtgtagc tgtttgctacgacacactaaagcacatcataccaaatagtgagaaaatgtcaaagcgcaagatatcaaaggctttgatct tacaagagaccaagaagcatattcgtgaccttgaacatcacttacaagatatcctacaagtcagagcaccactcaaaggt aaatcagtgctatatgactcagaggagaaactgacggaggcaagcttgagcactgtgagacacgactttgctgatcaaca acaactgttttacgttgttaactgtaaccagcagaggaaacgtagtaatataccgtcagatgcagaagtaggacttgtta atctccgagagaagaaatgtcctttatttgttattcccactaagaagctgcaagacttctacaaacaggatggtgacaaa tacacaagaaaggacaaacataagagtatcaaatcctggacattacaagatggtaaaatcagtgagaaaaagccgataaa caaacacatcctgcaggttctagctgatcaagaggagacagaacaagccgctgccaggatatgttccctatatgatgaac agaacgtaccaggatcaggggtatcactacacaaggaagaagaggagcagagtatgtatgacatggacttgatgagggag atgacccccacaaagtcagatttccgtacagactccaccagtacaccacgaagtaatgtggacttgtatttcaactctga tccctccttggatgaagatgttacttacatactgccatcagacctggccatatcccctatcaaactaccagatctagagg atgatggatcagatcaaacagctcctttctcaccagctactctactggccttacagcaagccgagtccggggagtatgag atagacatagaggacttgttatgctccgagtctatagaacacatgaacttggaggaggaagaagcggaaatcctcaatac acatacacctagaagtcattctatacaggtcaaacaacgaggacacaaacgtgatagcattaatagaggtagaagtttgt cttcagacaggaaatcaacatcaaagacacaacaaccgaaatgtcgacgtaaacttgagagtgtctttcaagaggatgta aggaaaacaacacaaagatcagaggaaaatacaaagaaattcaaatatgcaacttcatcaaagggaggaacatttttgat tggacaactcctgggtgacagtagcagaaactctgtacaatctgaaaatgatgatgaacagggtagacacccgtaccttt acaagttctatgacaaaggaaatgaaggaaaacacagtgatcacagcttacatccagaaaataaacatcaggtattaaat cccagcagatcacaacacagactggattatacctccaggagcagtaccagggaatcatcagttaaaggtcattcgggtcg aaccatacagatagacgacctgattacagagtatacccttaaacctgacccgccattatctgcgggtaataaagaggagg gaaaagatgcagcgattttcagcaatgaggatataatcactatccatgacaattccaaggatgaccgagatcttcccaac ctaaggatggtaccagacatacatggacaggatagctttgacaaagatttctgtccctttgatcttaattctactgatga aatgggcttctatactttatctcatggtacaagctcacagaccagtgaccagctgacatgctcagatggaggcagtttct ctacgtggagcagccaacttggtctcgagacaactagctcctctgctctcagcagccaagttgtgcccgagtttgagttc atccccattgaaacagagttcatcatgatctga |
Protein
Protein ID | pfu_aug2.0_1418.1_28275.t1 |
---|---|
Definition | - |
>pfu_aug2.0_1418.1_28275.t1 MKTMPKGSVPMRIRRRQSDAKWRASVAVCYDTLKHIIPNSEKMSKRKISKALILQETKKHIRDLEHHLQDILQVRAPLKG KSVLYDSEEKLTEASLSTVRHDFADQQQLFYVVNCNQQRKRSNIPSDAEVGLVNLREKKCPLFVIPTKKLQDFYKQDGDK YTRKDKHKSIKSWTLQDGKISEKKPINKHILQVLADQEETEQAAARICSLYDEQNVPGSGVSLHKEEEEQSMYDMDLMRE MTPTKSDFRTDSTSTPRSNVDLYFNSDPSLDEDVTYILPSDLAISPIKLPDLEDDGSDQTAPFSPATLLALQQAESGEYE IDIEDLLCSESIEHMNLEEEEAEILNTHTPRSHSIQVKQRGHKRDSINRGRSLSSDRKSTSKTQQPKCRRKLESVFQEDV RKTTQRSEENTKKFKYATSSKGGTFLIGQLLGDSSRNSVQSENDDEQGRHPYLYKFYDKGNEGKHSDHSLHPENKHQVLN PSRSQHRLDYTSRSSTRESSVKGHSGRTIQIDDLITEYTLKPDPPLSAGNKEEGKDAAIFSNEDIITIHDNSKDDRDLPN LRMVPDIHGQDSFDKDFCPFDLNSTDEMGFYTLSHGTSSQTSDQLTCSDGGSFSTWSSQLGLETTSSSALSSQVVPEFEF IPIETEFIMI |