Gene
Gene Model ID | pfu_aug2.0_1445.1_18336 |
---|---|
Locus | scaffold1445.1 : 82295 ... 114685 : - |
To GenomeBrowser | scaffold1445.1:82295..114685 |
Genes list of scaffold | scaffold1445.1 |
Synonym | pfu_aug1.0_60.1_29056 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_1445.1_18336.t1 | 1 | 1 | XRN_N | 1 | 256 | 0.0 | 375.1 | 0.0 | 0.0 | 374.5 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_1445.1_18336.t1 | gi|524864790|ref|XP_005089229.1| | PREDICTED: 5'-3' exoribonuclease 2-like [Aplysia californica] | 0.0 |
pfu_aug2.0_1445.1_18336.t1 | gi|755988511|ref|XP_011311873.1| | PREDICTED: 5'-3' exoribonuclease 2 homolog [Fopius arisanus] | 0.0 |
pfu_aug2.0_1445.1_18336.t1 | gi|291242576|ref|XP_002741181.1| | PREDICTED: 5'-3' exoribonuclease 2 [Saccoglossus kowalevskii] | 0.0 |
pfu_aug2.0_1445.1_18336.t1 | gi|749758222|ref|XP_011141155.1| | PREDICTED: 5'-3' exoribonuclease 2 homolog [Harpegnathos saltator] | 0.0 |
pfu_aug2.0_1445.1_18336.t1 | gi|759079411|ref|XP_011349523.1| | PREDICTED: 5'-3' exoribonuclease 2 homolog isoform X2 [Cerapachys biroi] | 0.0 |
Transcript
Transcript ID | pfu_aug2.0_1445.1_18336.t1 |
---|---|
Definition | - |
>pfu_aug2.0_1445.1_18336.t1 atgggagtaccggcgttctttcgatggttgagtaagaaatatccgtcgattctagtacactgtgtagaagagaaggcaaa ggaagtagatggtgtacagatcccagtggataccagtttacctaatccaaatgactacgagtttgataacttgtatcttg atatgaatggtattatccatccttgttgtcacccggaggataaaccagcacctaagaatgaagatgagatgatggttttg atctttgagttcatagacagaatattttctattgtacgacccaggaaggttttatacatggccattgatggagtggcacc gagagctaagatgaaccagcagagatccaggagattcagagcatcaaaagaaagcaaagagaatatagaggagatggcta gattgagggaggagctgtcagctaaaggctatcacttacccccagaaaaacctaaggaggaacactttgatagtaactgt attactcctggaaccccgttcatgtttcgcttggcagactgtctacgctattacatacatgacagattaaataatgaccc aggctggcaaaacgtcaaagtcattctgtctgatgcaaatgtaccgggggaaggtgaacataaaataatggactatatca gaagacaacgagctcagccagaccatgatgctaacacacggcattgtttatgtggagccgatgctgatttgatcatgtta gggttagccacccacgagccaaatttcacaattatcagagaggagtttgttcctaacaagccaagaccatgtaatctttg tggacaagttggtcatgaaatgaaagaatgtacaggtttacctaaagatatgtgtggagagcatgatgagctgccaaaat taatgggagaagagcaaaagttcatatttctcaggttaaatattttgagagaatatttagaaagagaattacgaatggac aatctaccgttcaaatacgattttgagagagctctagatgactgggtttttatgtgcttctttgtgggtaatgattttct cccacatttgccatcattagaaatccgtgaaggtgccatagacagattggttagactgtacaaagatgctgtcagaaaaa ctgggggtttcctgacaaacagtggtgttgtgaatttagagagagtccagttagtaatgagtgatttaggaaaagtagag gatgaaattttcaaaagaaggagagatacagagcttgaatttagaagacgggataaagaaaagaaaagaagggcaaagag atggtcagagggtcccagatgggctccaggtggtcagtttgcacctcagcctcttggtcactcacacacggtcagtaatc cacgacaggaggcgtataaaggcaggatggacgcagctaatcatgatgcagctagtcagctaaggtcattaatgactcga gatggtgatggtaatcaaaggggcgtcaaaaggaaatcagatggagacgggcagaggggtcgggaacaagaggaagagga ggaggaagagaaggagcctgatgatgaagtcaggttatgggaagatggctggaaggacagatattacaagtcaaagtttg gtgtagatgtaacagatatagacttcagacacactgtagccaaccactatgtacgaggtctgtgctgggttctcagatat tactaccagggctgtgcttcatggaagtggtactttccttatcactacgcaccatttgcctcagattttgttaatatcgg gcagctatctaacgactttgaaaagaagaccacaccttttaagccattagaacagttaatgggtgtgttcccagcagcca gtaagaaacatctaccagtcacatggcagaggctgatgtgtgatccagagtctcccatcatagatttttatcctgtggat tttaaaatagatctgaatggaaagaaatatgcatggcaaggagttgctttattaccgtttgttgatgagaagaggctgct ggcggccttggaaaatgtttatcctgatctcacaccgggagaacaggagaggaatatatggggagatgacagactatttg ttggtattagacaccctgcatacagcttttttgaaggtctatatgagggaagtcaagtcacagagggagtagatgtagat acaaagctgagccagggtatgggtggtttggtatggtgtgataatagggctgtaatgacaggagatacagtgccttcacc tttaccagcattacaaggtattccagataacagagctatatgtgtaaagttcaaggatcctcagtttgatcctgatttcc tgttcgaggcaaaggtcctaccaacggctgtaatgccagacagagtattgaagccggaggattttaacagacgtaatcct ggtcagcattggatgccgcagcttggaatgtcacgacaaagtggatatcagcaaaacaaggatatgggatcggcaatcag gatggtcagacatggtataggatcaggaggtggaggtcagtttggcaatgtgcctcctcccaactacaaccaaggaggag gaggaggaggaaggcaaagaaatcaatatggtggatatggtaacaatcagcagcagtatgataatagagggaggaaccat ggaggttctgggaatatgggttggcaaagcaatatgagaggacagcaaaacgcctacaacagcaatcaacaaagaggtta tggcggaaatcagggaggttatggcgggaatcaaggaggttacgggggcaaccaaggaggttatggatggaatcagggcg gatatggcggtaaccgtgcttacggaggtaatcaaggaggaggttatggcgggaaccagggaggttatggaggtaaccaa ggcaactacaggggaggtaacaagtacggaggtaatcaaggcggatacaacagacagaggtactag |
Protein
Protein ID | pfu_aug2.0_1445.1_18336.t1 |
---|---|
Definition | - |
>pfu_aug2.0_1445.1_18336.t1 MGVPAFFRWLSKKYPSILVHCVEEKAKEVDGVQIPVDTSLPNPNDYEFDNLYLDMNGIIHPCCHPEDKPAPKNEDEMMVL IFEFIDRIFSIVRPRKVLYMAIDGVAPRAKMNQQRSRRFRASKESKENIEEMARLREELSAKGYHLPPEKPKEEHFDSNC ITPGTPFMFRLADCLRYYIHDRLNNDPGWQNVKVILSDANVPGEGEHKIMDYIRRQRAQPDHDANTRHCLCGADADLIML GLATHEPNFTIIREEFVPNKPRPCNLCGQVGHEMKECTGLPKDMCGEHDELPKLMGEEQKFIFLRLNILREYLERELRMD NLPFKYDFERALDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVRLYKDAVRKTGGFLTNSGVVNLERVQLVMSDLGKVE DEIFKRRRDTELEFRRRDKEKKRRAKRWSEGPRWAPGGQFAPQPLGHSHTVSNPRQEAYKGRMDAANHDAASQLRSLMTR DGDGNQRGVKRKSDGDGQRGREQEEEEEEEKEPDDEVRLWEDGWKDRYYKSKFGVDVTDIDFRHTVANHYVRGLCWVLRY YYQGCASWKWYFPYHYAPFASDFVNIGQLSNDFEKKTTPFKPLEQLMGVFPAASKKHLPVTWQRLMCDPESPIIDFYPVD FKIDLNGKKYAWQGVALLPFVDEKRLLAALENVYPDLTPGEQERNIWGDDRLFVGIRHPAYSFFEGLYEGSQVTEGVDVD TKLSQGMGGLVWCDNRAVMTGDTVPSPLPALQGIPDNRAICVKFKDPQFDPDFLFEAKVLPTAVMPDRVLKPEDFNRRNP GQHWMPQLGMSRQSGYQQNKDMGSAIRMVRHGIGSGGGGQFGNVPPPNYNQGGGGGGRQRNQYGGYGNNQQQYDNRGRNH GGSGNMGWQSNMRGQQNAYNSNQQRGYGGNQGGYGGNQGGYGGNQGGYGWNQGGYGGNRAYGGNQGGGYGGNQGGYGGNQ GNYRGGNKYGGNQGGYNRQRY |