Gene
Gene Model ID | pfu_aug2.0_1478.1_28311 |
---|---|
Locus | scaffold1478.1 : 109466 ... 114505 : - |
To GenomeBrowser | scaffold1478.1:109466..114505 |
Genes list of scaffold | scaffold1478.1 |
Synonym | pfu_aug1.0_513.1_00340 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_1478.1_28311.t1 | 2 | 1 | Somatomedin_B | 223 | 248 | 1.6e-06 | 27.9 | 3.3e-06 | 0.025 | 14.5 |
pfu_aug2.0_1478.1_28311.t1 | 2 | 2 | Somatomedin_B | 307 | 327 | 1.6e-06 | 27.9 | 2.8e-07 | 0.0021 | 18.0 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_1478.1_28311.t1 | gi|328719877|ref|XP_003246888.1| | PREDICTED: uncharacterized protein LOC100570050 [Acyrthosiphon pisum] | 4.0e-10 |
Transcript
Transcript ID | pfu_aug2.0_1478.1_28311.t1 |
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Definition | - |
>pfu_aug2.0_1478.1_28311.t1 atgtataatgctacaattgggtacgatcaagactatccaatgtataatgctacaattgggtacgactatccaatgtataa tgttacagagggatacggctatctaatgtataatgctacagatgaatacgatcgcgactatccaatgcataatgctaccg tgggatacgactatccaatgcataatgctaccgtgggatacgactatccaaggcataatgctacagatttatacgatcac gaatatccaatgtataatgctaccgtgggatacgactatccaatgcaaaatgctacaaatggatacgatcacgacaatcc aatgcataatgctacagagggatacgactatctaatgtataatgctacagatggatacgatcgcgactatccaatgcata atgctaccgtgggatacgactatccaatgcataatgctacagtgggatacgactatctaatgcataatgctacagaggga tacgatcaagactatccaatgtataatgctacagatgggtctgactatgataacaacaatgactacacatatgactataa ggatgactacttcgaaaactttatggaagagtactttgaaaacaacagaggcgtcagtaaaaagaattactttgacgtag acggagatgattgtgctagtttctatacgtgtaactccagcttctcctatcgtacatgttactgtgataaaatgtgcgag gcttacaacgattgttgttttgatgcaggatactctgttggatcgagtaccccgactgataaacaaaaagagttgatagg ttatatgagttgcaaagctttaccggatatttacacagattggtatatgttcataattgattcttgtccttctgattcaa atgtttatatcaagcatctatgctcaaatgttgatgtcgantcctatcgtacatgttactgtgataaaatgtgcgaggct tacaacgattgttgttttgatgcaggatactctgttggatcgagtaccccgactgataaacaaaaagagttgataggtta tatgagttgcaaagttttaccggatatttacacagattggtatatgttcataattgattcttgtccttctgattcaaatg tttatatcaagcatctatgctcaaatgttgatgtcgatgacatttacagtagaactcctgcgagcggaaaagaaagtggg atgatttacaaaaacatgttctgtgctatatgtcatggagaagactttttactttggcttccagagatttactgcgagtg ggggatgtcatatacgggaaactataccacagaaacgctgctgaatttggaggaatgccgattgagttttgttccaaatg atagctcggtggagattcgaatctgctatcctatggtttcggggtgctcccccgaaagtgattataggacgttatctaat gttactaataaatgtgaatctgcccagaacaagattgtttttacactcgataaagtgtataagaataagtactgttatga atgtgacattcaaaaagcaagcaatgcttcgtgctcccgttccgattacaatgtaacatttcctggggggtcacgtggac tattcatgtacagctaccgaattttatttaatcttgaagatagaaaagcaaagagtaccaaagaccatttgttcttccct tcagaagaggaggaatataaccttgaaaaaaacacatttaatttgctaaagatcttttatcttaattttgttttgtttta tgactatgggctcaaaacctaccagcacgaggacgcaaaacagaaaataacaaagaaatggcctaaccagtgggcacctc taaggaatgcgctggtatag |
Protein
Protein ID | pfu_aug2.0_1478.1_28311.t1 |
---|---|
Definition | - |
>pfu_aug2.0_1478.1_28311.t1 MYNATIGYDQDYPMYNATIGYDYPMYNVTEGYGYLMYNATDEYDRDYPMHNATVGYDYPMHNATVGYDYPRHNATDLYDH EYPMYNATVGYDYPMQNATNGYDHDNPMHNATEGYDYLMYNATDGYDRDYPMHNATVGYDYPMHNATVGYDYLMHNATEG YDQDYPMYNATDGSDYDNNNDYTYDYKDDYFENFMEEYFENNRGVSKKNYFDVDGDDCASFYTCNSSFSYRTCYCDKMCE AYNDCCFDAGYSVGSSTPTDKQKELIGYMSCKALPDIYTDWYMFIIDSCPSDSNVYIKHLCSNVDVXSYRTCYCDKMCEA YNDCCFDAGYSVGSSTPTDKQKELIGYMSCKVLPDIYTDWYMFIIDSCPSDSNVYIKHLCSNVDVDDIYSRTPASGKESG MIYKNMFCAICHGEDFLLWLPEIYCEWGMSYTGNYTTETLLNLEECRLSFVPNDSSVEIRICYPMVSGCSPESDYRTLSN VTNKCESAQNKIVFTLDKVYKNKYCYECDIQKASNASCSRSDYNVTFPGGSRGLFMYSYRILFNLEDRKAKSTKDHLFFP SEEEEYNLEKNTFNLLKIFYLNFVLFYDYGLKTYQHEDAKQKITKKWPNQWAPLRNALV |