Gene
Gene Model ID | pfu_aug2.0_1509.1_31724 |
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Locus | scaffold1509.1 : 48215 ... 52555 : - |
To GenomeBrowser | scaffold1509.1:48215..52555 |
Genes list of scaffold | scaffold1509.1 |
Synonym | pfu_aug1.0_16.1_07318 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_1509.1_31724.t1 | 2 | 1 | SLX9 | 10 | 25 | 1.0e-20 | 74.3 | 0.6 | 2200.0 | -1.0 |
pfu_aug2.0_1509.1_31724.t1 | 2 | 2 | SLX9 | 88 | 206 | 1.0e-20 | 74.3 | 2.8e-24 | 1.0e-20 | 74.3 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_1509.1_31724.t1 | gi|524886744|ref|XP_005099964.1| | PREDICTED: protein FAM207A-like isoform X1 [Aplysia californica] | 3.9937e-43 |
pfu_aug2.0_1509.1_31724.t1 | gi|676478210|ref|XP_009061359.1| | hypothetical protein LOTGIDRAFT_234815 [Lottia gigantea] | 1.0e-34 |
pfu_aug2.0_1509.1_31724.t1 | gi|675888602|ref|XP_009029803.1| | hypothetical protein HELRODRAFT_181777 [Helobdella robusta] | 5.0e-34 |
pfu_aug2.0_1509.1_31724.t1 | gi|701351146|ref|XP_009999377.1| | PREDICTED: protein FAM207A [Chaetura pelagica] | 9.0e-27 |
pfu_aug2.0_1509.1_31724.t1 | gi|291228689|ref|XP_002734316.1| | PREDICTED: protein FAM207A-like [Saccoglossus kowalevskii] | 9.0e-27 |
Transcript
Transcript ID | pfu_aug2.0_1509.1_31724.t1 |
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Definition | - |
>pfu_aug2.0_1509.1_31724.t1 atgggaaagcagaagaggtccagatctaaagcacacatttctgcagtaaaaccaaatggaaagaaaaatgatgcaaatgt tgacaacaacaaagttgacgtagttgattcaatggatacggatgttaaggttcaaaccatggcagattttatcaatagat ctgataacatttttagtgatgtgaagattgatccacaagctctcgccaagaaactaccagattttgatgctagaagcgct attacgagcaagtctctaaaagagctgaaattaaagaaaaaagacaaaaagaagttacgacatgacctttggatcaagaa gttaagtgccatagatgcagccaagaaagaggctaaggaaaagaagaggagacagcagacccctgtggtgggggatatag gggcaatgggcgacgccctacctacattagatctactgatgatgggagacaaaaagaaaaaagagagacctgaggaaaaa ccaagaagtgttcctaaagaaaagaagcggaagaaacaaatgttagacgatatagcactctttcatcaagtcacggcaca tcccgcattcaaagaaaatccaacgtcaacaataaaagaacatttagaaaataaactcaaacaagatgactcgatggaaa cgtaa |
Protein
Protein ID | pfu_aug2.0_1509.1_31724.t1 |
---|---|
Definition | - |
>pfu_aug2.0_1509.1_31724.t1 MGKQKRSRSKAHISAVKPNGKKNDANVDNNKVDVVDSMDTDVKVQTMADFINRSDNIFSDVKIDPQALAKKLPDFDARSA ITSKSLKELKLKKKDKKKLRHDLWIKKLSAIDAAKKEAKEKKRRQQTPVVGDIGAMGDALPTLDLLMMGDKKKKERPEEK PRSVPKEKKRKKQMLDDIALFHQVTAHPAFKENPTSTIKEHLENKLKQDDSMET |