Gene
Gene Model ID | pfu_aug2.0_1536.1_21677 |
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Locus | scaffold1536.1 : 129216 ... 138521 : + |
To GenomeBrowser | scaffold1536.1:129216..138521 |
Genes list of scaffold | scaffold1536.1 |
Synonym | pfu_aug1.0_8238.1_17259 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_1536.1_21677.t1 | 1 | 1 | Lipocalin_2 | 30 | 80 | 6.1e-06 | 26.0 | 7.7e-10 | 1.1e-05 | 25.1 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_1536.1_21677.t1 | gi|383848263|ref|XP_003699771.1| | PREDICTED: apolipoprotein D-like isoform X2 [Megachile rotundata] | 3.0e-09 |
pfu_aug2.0_1536.1_21677.t1 | gi|512931794|ref|XP_004932389.1| | PREDICTED: apolipoprotein D-like isoform X1 [Bombyx mori] | 1.0e-08 |
pfu_aug2.0_1536.1_21677.t1 | gi|512931798|ref|XP_004932390.1| | PREDICTED: apolipoprotein D-like isoform X2 [Bombyx mori] | 1.0e-08 |
pfu_aug2.0_1536.1_21677.t1 | gi|390351311|ref|XP_003727634.1| | 1.0e-07 | |
pfu_aug2.0_1536.1_21677.t1 | gi|498988871|ref|XP_004531465.1| | PREDICTED: apolipoprotein D-like [Ceratitis capitata] | 1.0e-07 |
Transcript
Transcript ID | pfu_aug2.0_1536.1_21677.t1 |
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Definition | - |
>pfu_aug2.0_1536.1_21677.t1 atgtttacacttctttttgtaatacggtcatataatggtcaaattcatacacctggagtatgtccctgcgttacaactgt gcagaatgtcgatgcaaaattgtattccggtcaatggtttgagtacaaacgctacttcacaatcttccaacaaggaattg agtgttccagagccagatacaggcccacagacggtggaagaattcttgtaaggaacagtggattcaacaccagagacaga ctatcaaccgaagttgatcgaacttggctacatgtgccctcggggactcttggtccaccagcagcgacactcaccaagtg gttcaaatgtaaaacgtcttcaaattcaaaagttacacaacttatattaacgtatcacgttggctcagattttgccgtta gggagtcgaaggagcaggaggaaaccggagtacccggagaaaaatcccctgaagaggtctgggtgggggaccacctatcc tccaacataagacccttcgccgaatctgggattcgaacccggaagcttagaggagatatgcgagcgcgctaccactgcgc taatccggctttaaacataaccctactaaatatagacatcaatcttaagcaccaaaaccaaaaacagagcattagatcac catcacctattaaacacagacatgcataa |
Protein
Protein ID | pfu_aug2.0_1536.1_21677.t1 |
---|---|
Definition | - |
>pfu_aug2.0_1536.1_21677.t1 MFTLLFVIRSYNGQIHTPGVCPCVTTVQNVDAKLYSGQWFEYKRYFTIFQQGIECSRARYRPTDGGRILVRNSGFNTRDR LSTEVDRTWLHVPSGTLGPPAATLTKWFKCKTSSNSKVTQLILTYHVGSDFAVRESKEQEETGVPGEKSPEEVWVGDHLS SNIRPFAESGIRTRKLRGDMRARYHCANPALNITLLNIDINLKHQNQKQSIRSPSPIKHRHA |