Gene
Gene Model ID | pfu_aug2.0_1536.1_21678 |
---|---|
Locus | scaffold1536.1 : 139030 ... 150878 : - |
To GenomeBrowser | scaffold1536.1:139030..150878 |
Genes list of scaffold | scaffold1536.1 |
Synonym | pfu_aug1.0_8238.1_17260 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_1536.1_21678.t1 | 2 | 1 | Carb_anhydrase | 66 | 80 | 1.9e-16 | 59.8 | 0.48 | 1400.0 | -2.1 |
pfu_aug2.0_1536.1_21678.t1 | 2 | 2 | Carb_anhydrase | 225 | 297 | 1.9e-16 | 59.8 | 1.6e-19 | 4.9e-16 | 58.4 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_1536.1_21678.t1 | gi|195997291|ref|XP_002108514.1| | hypothetical protein TRIADDRAFT_18628 [Trichoplax adhaerens] | 1.0e-10 |
pfu_aug2.0_1536.1_21678.t1 | gi|499364687|ref|WP_011052717.1| | MULTISPECIES: carbonic anhydrase [Xanthomonas] | 2.0e-09 |
pfu_aug2.0_1536.1_21678.t1 | gi|21233413|ref|NP_639330.1| | 2.0e-09 |
Transcript
Transcript ID | pfu_aug2.0_1536.1_21678.t1 |
---|---|
Definition | - |
>pfu_aug2.0_1536.1_21678.t1 gcacatgtggttttctacgaagatgacgatccatccgggcaacaagtgtcgagagtgaacattggtggtcgctatggata cagtgacgccttcattgttataggcgtctttcttgaggcacatgtggttttctacgaagatgacgatccatccgggcaac aagtgtcgagagtgaacattggtggtcgctatggatacagtgacgccttcattgttataggcgtctttcttgaggtagat gacgatggttttggcgatgagccagatgatgacgaatgtgaggaaattttgagtggagatgactataacaaatacaagaa gaatggcaaaaagggaaaatatgagagaagaaacacaaaggataaatcaaaacttcggcagaaattcagaaacaattatg aagacgatgacgatgacgacggcgacgattataatagtagtagaagtagtagtagtagtagtagtagcagcagtgaaagt caagaaaatggttatttggacaacaataattatggttggaggtggtggaataagtatggagatcggggtcgacgggggcg ttgcaaagtccgaaaggcgcgaagactaagtcgtatactggagtgtgcgtaccgaaataagaaagtccatgacttcaggc acctagatgataatgaggtattggagatagacatcagacccgaggatgtcctaccaccccctaaccacagacaatattac acttacgaagggtccctgaccacccctccgtgtaatgagacagtccattggatagtaatgaaatgtcacgtgaaagtatc cgaacgagtgctccatgccttacgtaacgtggaaggataccctgatggtaaaacgctgagtgtattcggtaccaggagac caacacaatataatgaaaatccagtttataaaaacttttggaagtga |
Protein
Protein ID | pfu_aug2.0_1536.1_21678.t1 |
---|---|
Definition | - |
>pfu_aug2.0_1536.1_21678.t1 AHVVFYEDDDPSGQQVSRVNIGGRYGYSDAFIVIGVFLEAHVVFYEDDDPSGQQVSRVNIGGRYGYSDAFIVIGVFLEVD DDGFGDEPDDDECEEILSGDDYNKYKKNGKKGKYERRNTKDKSKLRQKFRNNYEDDDDDDGDDYNSSRSSSSSSSSSSES QENGYLDNNNYGWRWWNKYGDRGRRGRCKVRKARRLSRILECAYRNKKVHDFRHLDDNEVLEIDIRPEDVLPPPNHRQYY TYEGSLTTPPCNETVHWIVMKCHVKVSERVLHALRNVEGYPDGKTLSVFGTRRPTQYNENPVYKNFWK |