Gene
Gene Model ID | pfu_aug2.0_15518.1_29834 |
---|---|
Locus | scaffold15518.1 : 3 ... 2311 : + |
To GenomeBrowser | scaffold15518.1:3..2311 |
Genes list of scaffold | scaffold15518.1 |
Synonym | pfu_aug1.0_10660.1_10175 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_15518.1_29834.t1 | 1 | 1 | SRP54 | 53 | 124 | 2.4e-17 | 63.0 | 2.5e-20 | 3.1e-17 | 62.6 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_15518.1_29834.t1 | gi|585705440|ref|XP_006823636.1| | PREDICTED: signal recognition particle receptor subunit alpha homolog [Saccoglossus kowalevskii] | 0.0 |
pfu_aug2.0_15518.1_29834.t1 | gi|350396130|ref|XP_003484452.1| | PREDICTED: signal recognition particle receptor subunit alpha homolog isoform X2 [Bombus impatiens] | 0.0 |
pfu_aug2.0_15518.1_29834.t1 | gi|752889986|ref|XP_011262966.1| | PREDICTED: signal recognition particle receptor subunit alpha homolog isoform X2 [Camponotus floridanus] | 0.0 |
pfu_aug2.0_15518.1_29834.t1 | gi|752889984|ref|XP_011262965.1| | PREDICTED: signal recognition particle receptor subunit alpha homolog isoform X1 [Camponotus floridanus] | 0.0 |
Transcript
Transcript ID | pfu_aug2.0_15518.1_29834.t1 |
---|---|
Definition | - |
>pfu_aug2.0_15518.1_29834.t1 atgatctgtaaaggaaaagtcctgggaatgtttggttccataactaacacagtaaaatcaacattagaggaatcctgcgt gcagatcttgttacccaaacggcgtatagacatactaagagacgcgatggacgctaagcagaagggccgtccattctgtg taacattctgtggtgttaatggagtgggcaaatctacaaatctagctaagatctgcttttggttggttgagaacaatttc cgtgtactgattgccgcctgtgacacatttagagctggagctgttgagcagttacggacgcatgtacgtaagctgaatgc acttcaccctgcagacagacatcagggacagacaatggtacaactgtacgagaagggatatggaaaagactcagctggaa tcgctatggaggcaattaattatg |
Protein
Protein ID | pfu_aug2.0_15518.1_29834.t1 |
---|---|
Definition | - |
>pfu_aug2.0_15518.1_29834.t1 MICKGKVLGMFGSITNTVKSTLEESCVQILLPKRRIDILRDAMDAKQKGRPFCVTFCGVNGVGKSTNLAKICFWLVENNF RVLIAACDTFRAGAVEQLRTHVRKLNALHPADRHQGQTMVQLYEKGYGKDSAGIAMEAINY |