Gene
Gene Model ID | pfu_aug2.0_1919.1_31963 |
---|---|
Locus | scaffold1919.1 : 60206 ... 65019 : + |
To GenomeBrowser | scaffold1919.1:60206..65019 |
Genes list of scaffold | scaffold1919.1 |
Synonym | pfu_aug1.0_11799.1_60944 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_1919.1_31963.t1 | 1 | 1 | C1q | 30 | 156 | 2.5e-21 | 75.9 | 4.0e-25 | 3.0e-21 | 75.7 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_1919.1_31963.t1 | gi|657755835|ref|XP_008313486.1| | PREDICTED: caprin-2 [Cynoglossus semilaevis] | 5.0e-10 |
pfu_aug2.0_1919.1_31963.t1 | gi|499040645|ref|XP_004570947.1| | 5.0e-10 |
Transcript
Transcript ID | pfu_aug2.0_1919.1_31963.t1 |
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Definition | - |
>pfu_aug2.0_1919.1_31963.t1 atgtttcgtacagaaatacttgtgatgttgacagtgatggccgtaacaatcaggggacagatatgtagtaatccagagaa agtttacttccaagcttggaattctgcaactttgacaaacatcaaaagcggccatatcttcgtcttcgatagaacaaaca caaaccatggaaatcactatgacagttccaatgggaattttaaagctcctagagacggcccgtacgtctttacatggacc gtcgttacccaggacaaatacagtataaatgttgaactgttccggaataacaaaagagtaagtcttgcacaagcagatgg tcagcccggaccacaaaatagttccggatctaacactgttgtgctggatcttaagacaggtgacgtggtgaatcttagat gtggtggttggatgaaccagggtcagcgacagctttatggctatacacactctacattttccggatgggcactatga |
Protein
Protein ID | pfu_aug2.0_1919.1_31963.t1 |
---|---|
Definition | - |
>pfu_aug2.0_1919.1_31963.t1 MFRTEILVMLTVMAVTIRGQICSNPEKVYFQAWNSATLTNIKSGHIFVFDRTNTNHGNHYDSSNGNFKAPRDGPYVFTWT VVTQDKYSINVELFRNNKRVSLAQADGQPGPQNSSGSNTVVLDLKTGDVVNLRCGGWMNQGQRQLYGYTHSTFSGWAL |