Gene
Gene Model ID | pfu_aug2.0_1921.1_05319 |
---|---|
Locus | scaffold1921.1 : 117636 ... 120498 : + |
To GenomeBrowser | scaffold1921.1:117636..120498 |
Genes list of scaffold | scaffold1921.1 |
Synonym | pfu_aug1.0_7.1_14680 |
Manual annotation
Annotation by Blast2GO
Annotation | GO |
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neuronal acetylcholine receptor subunit alpha-6-like | GO:0006810 |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_1921.1_05319.t1 | 1 | 1 | Neur_chan_LBD | 57 | 262 | 4.7e-38 | 130.4 | 8.59977e-42 | 6.4e-38 | 130.0 |
pfu_aug2.0_1921.1_05319.t1 | 2 | 1 | Neur_chan_memb | 271 | 378 | 1.1e-13 | 51.5 | 1.6e-17 | 1.2e-13 | 51.5 |
pfu_aug2.0_1921.1_05319.t1 | 2 | 2 | Neur_chan_memb | 410 | 433 | 1.1e-13 | 51.5 | 0.62 | 4600.0 | -2.8 |
Transcript
Transcript ID | pfu_aug2.0_1921.1_05319.t1 |
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Definition | - |
>pfu_aug2.0_1921.1_05319.t1 atggttaaagtagggctatttcctacgagaccatccatcacgcggccggtgtgtggaagcacttctatcaatattctttc tctaacaaacatgagatggaaaattatcattccattctgttttattcaaatttcccttacagcttcgcaaacacaggatg atatcgataaactaagagctgatctcctaagaaattattcgaagttttccagagggaatcacaatcagtcagcttcaaca atactggatccggaattcaccctcgtaaatataaacgaattcgatgaaataacggggacattcactgccgttggattttt tcgagtgttttggacggatgacagattggtttggaatgcatccgattatggaggcatcgacagaattttatttttcgaaa cacatgtgtggacgccgaatattgtcattgcaaattcaaacggaaatgaggagagtaacattcttggacatgagcgagta ccagtggttgctttgtcaaatggtactgttatttggctacctggtaaacattttaaaacattctgcagtccgaatgtaca gaaatttccctacgataatcagatttgtgaattctggtttgtcccatggggtttctcatctaaagatgtgatattcagcc caagtacacagaatgtcaaccttaatctttattctaacaatagtgtttgggagatgatcgacacatacttggtggcatct acccagaatccggataacaacttcgaattccagatgctgaaaatctacttccacctgaagcggcgggcaacattttatgt catcaacatggtattacccatagtggtgatgggatttctgaatctacttgtattcctattgccacctcaatcaggtgaaa gagtgggatactcaataacagttcttctggccatcagcgtctttctgacaatagcctctgataacttaccgagaaattcc taccctgctgtgtcttcattgtgtatcaagctgctcatggattttatcataagtagtatggtggtcctcttcaccatcct tgggctacgattctacaacaagggtaaggacaaaccagtcccaagcttcatcgaaaaactggcgcgaataattctttgca aatgtagacagagaaaggtagctgatggaaacgacgatgtaaaatattgtaatgaagtaagagaattcaaggaaaatgac aatgaaatcatcctgcattgctctgataccgagaaattcacatgggaggacgttggaaaagcttcagatatcgtgttctt ttttatatgtttgcttggtttcattggctcacatctaacgttttacatgtacgtttacgtgtag |
Protein
Protein ID | pfu_aug2.0_1921.1_05319.t1 |
---|---|
Definition | - |
>pfu_aug2.0_1921.1_05319.t1 MVKVGLFPTRPSITRPVCGSTSINILSLTNMRWKIIIPFCFIQISLTASQTQDDIDKLRADLLRNYSKFSRGNHNQSAST ILDPEFTLVNINEFDEITGTFTAVGFFRVFWTDDRLVWNASDYGGIDRILFFETHVWTPNIVIANSNGNEESNILGHERV PVVALSNGTVIWLPGKHFKTFCSPNVQKFPYDNQICEFWFVPWGFSSKDVIFSPSTQNVNLNLYSNNSVWEMIDTYLVAS TQNPDNNFEFQMLKIYFHLKRRATFYVINMVLPIVVMGFLNLLVFLLPPQSGERVGYSITVLLAISVFLTIASDNLPRNS YPAVSSLCIKLLMDFIISSMVVLFTILGLRFYNKGKDKPVPSFIEKLARIILCKCRQRKVADGNDDVKYCNEVREFKEND NEIILHCSDTEKFTWEDVGKASDIVFFFICLLGFIGSHLTFYMYVYV |