Gene
Gene Model ID | pfu_aug2.0_2024.1_15359 |
---|---|
Locus | scaffold2024.1 : 17066 ... 81745 : - |
To GenomeBrowser | scaffold2024.1:17066..81745 |
Genes list of scaffold | scaffold2024.1 |
Synonym | pfu_aug1.0_16.1_07283 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_2024.1_15359.t1 | 1 | 1 | Fibrinogen_C | 8 | 221 | 0.0 | 224.4 | 0.0 | 0.0 | 224.2 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_2024.1_15359.t1 | gi|499029173|ref|XP_004565306.1| | PREDICTED: microfibril-associated glycoprotein 4-like [Maylandia zebra] | 0.0 |
pfu_aug2.0_2024.1_15359.t1 | gi|348523952|ref|XP_003449487.1| | PREDICTED: microfibril-associated glycoprotein 4-like isoform X1 [Oreochromis niloticus] | 0.0 |
pfu_aug2.0_2024.1_15359.t1 | gi|554852794|ref|XP_005936620.1| | PREDICTED: microfibril-associated glycoprotein 4-like isoform X1 [Haplochromis burtoni] | 0.0 |
Transcript
Transcript ID | pfu_aug2.0_2024.1_15359.t1 |
---|---|
Definition | - |
>pfu_aug2.0_2024.1_15359.t1 atgagattcgaatgtattaagccgcaagactgctccagaataaagcaaatgttcccaggtagtaagtccggtgtgtatac gatctacccaggaagtatagggattggagtacacgtgtactgtgacatgtccgagtcatgtggagggtggacggtgatac aacgtagaatggatggaaccggcatcttttacagggattgggatgactacaagaaaggctttgggaaaccggacaagaat tactggctaggcaatgacattatacatcaactgacggccaacagaaatcatgagttgctgatagttataagggacttcga tgatacagtgagatatgcccgttacggaactttctctatcggaagtgagaaggaaaaatataaactaaatgtaacaggat acagcgggaatgcaggtgatagcttaacctttcataatggatctcaattcagcacccatgatcaggataacgacagcgat ataaagacatgcgcggtcttctataaaggagcttggtggtacaagaactgccttcaatccaacctgaacgctgagtacac cagtggtggaacatataactctactgctgattcttacggcgtcgtatggcagagctggagggggtatcgctactcactta aaacaacagtaatgatggttcgataa |
Protein
Protein ID | pfu_aug2.0_2024.1_15359.t1 |
---|---|
Definition | - |
>pfu_aug2.0_2024.1_15359.t1 MRFECIKPQDCSRIKQMFPGSKSGVYTIYPGSIGIGVHVYCDMSESCGGWTVIQRRMDGTGIFYRDWDDYKKGFGKPDKN YWLGNDIIHQLTANRNHELLIVIRDFDDTVRYARYGTFSIGSEKEKYKLNVTGYSGNAGDSLTFHNGSQFSTHDQDNDSD IKTCAVFYKGAWWYKNCLQSNLNAEYTSGGTYNSTADSYGVVWQSWRGYRYSLKTTVMMVR |