Gene
Gene Model ID | pfu_aug2.0_204.1_13790 |
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Locus | scaffold204.1 : 159623 ... 212116 : - |
To GenomeBrowser | scaffold204.1:159623..212116 |
Genes list of scaffold | scaffold204.1 |
Synonym | pfu_aug1.0_12166.1_61006 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_204.1_13790.t1 | 2 | 1 | Med15 | 16 | 51 | 0.0 | 377.3 | 3.5e-13 | 5.1e-09 | 34.9 |
pfu_aug2.0_204.1_13790.t1 | 2 | 2 | Med15 | 262 | 801 | 0.0 | 377.3 | 0.0 | 0.0 | 338.5 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_204.1_13790.t1 | gi|697042069|ref|XP_009583703.1| | PREDICTED: nuclear receptor coactivator 6 isoform X4 [Fulmarus glacialis] | 0.0 |
pfu_aug2.0_204.1_13790.t1 | gi|697042065|ref|XP_009583701.1| | PREDICTED: nuclear receptor coactivator 6 isoform X2 [Fulmarus glacialis] | 0.0 |
pfu_aug2.0_204.1_13790.t1 | gi|697042067|ref|XP_009583702.1| | PREDICTED: nuclear receptor coactivator 6 isoform X3 [Fulmarus glacialis] | 0.0 |
pfu_aug2.0_204.1_13790.t1 | gi|698405393|ref|XP_009809883.1| | PREDICTED: mediator of RNA polymerase II transcription subunit 15 isoform X3 [Gavia stellata] | 0.0 |
pfu_aug2.0_204.1_13790.t1 | gi|542170138|ref|XP_005493426.1| | PREDICTED: mediator of RNA polymerase II transcription subunit 15-like [Zonotrichia albicollis] | 0.0 |
Transcript
Transcript ID | pfu_aug2.0_204.1_13790.t1 |
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Definition | - |
>pfu_aug2.0_204.1_13790.t1 atggccgatcagatgatggattggagaagtgagcagtttagaagaaaagtaatcactcaaattgatgaagcgatcagaag tgccccaacaccaatgacaaagtccagtgctgaaatggaaaaccatgtcttccttaaagctaaaacaagggattactggt gtatgaaaactgcctacgtagggtgtactcactgggttttattaaaaacaaaaggaaaatatgagatcgctgaccaatcc gatatcaccgtgtttctacacaaagaggaatacgaatccgaaatagagcaggaactcggtgtacacaaactaaaacaaag gagggcgccgaggaagaagcacgactgtttgtttgtagtggacaatgtgcctctgagaattctacatcccagacatattt tcaagaaaacttgcgcaaaaattttacattttaagtctccgcgtgacaggcatatgtcggcncattttatatcacggaac aatatattcagaacgaactcgagatgtacggacgcaggaatgggatacgtctgcatggtgtttccgaggaaagcggggaa aatactgataaaattgtcatggaaaatcggagctgacatacccgatacagccctcggtggaagccatcgagtaggcccca aacaacgaggccaagcacgaccaatcattgcgaaatttgttggccataacttcaaaacccgacttcttaaaaacaaaaac aaattacgagggtcaacaccgcagatattcataaatgaagaccttacatcttcctgggatcagcagaaagagagggagaa gcagcaggcagtgggcgtgggaggaatgccccaggggctaggaccgaggggtgtgcccgggcagccgatgcaacaggacc ctctcaagtctctacaaacactgacaatgcagggaacatcaggactgggccccgggcaacctcaacaacagccaggtatg atgacacagcagcaacagcaacaacttctgctacgtcagcaacaactccagcaacaaagacatcaacaacaacttgcaca gatgcaggcaagcaataggcctccattacagagacaggatgcctttatggtgacctctacccagcatgtccagtcaacag cccagcccctccctgccagttctacatctcagataggatacaatcagccaggaatgccggcacctggcatgcaaccgaca cctggtatgcaacaagcacctggcatgcaagcggcacctggaatgcaacctgcacctggcatgcaacaagcacctggcat gcaagcggcacctggaatgcaacctgcacctggcatgcagcagagacaaggcatggcaacagggcaaatggtcaacatga tgcccacccaggcctctcagtttggccctcagggcatggctgggccctctcaaggacagatggacggacaagccttacaa caagggacacagccagctccatcccctaagtctatgatggcatccccctccccacaggccggtatagttccttcccctgc ctccagaggtcagccattcagtgctccttcacctagcagtgtcctcaatactccaggaaatcctaactcccagagccaag tgagccctgcccctcgatcccatgaagaacaggcgtacctggataaactgaacaaactatccaagtatatagaacctctc aggaggatgatcaacaaactgtctactaacagagatgaagagaggaagaaagatatcagcaaaatggaaggtctgctaaa gattcttacagacccttcaaaacgattgcccatggcgactttacagaagtgtgagcaggtcttagacaaactagagttat cacttaaaccttcgtcagtgtctaaagcccctacccccacagtatctacacacatgtgtcagcctttgattgacgctgta gcagctcacatgcagagtcccatgtttaatcactgtctacagcaaacatttggtcccgctgtcactgcgctgtacggatc acccatacgagctccaagtcctccaccaaagaggaagtatgaggagttagaagaggaggaagaggatgagattcctcaca tcctacagggggagatagctcgccttggtaacaggttcaaggtcactttggatcctacacaacattccttgtctaacgca atacatctgttgtgcagaatagatgacaagcgtctaccaagtgttccgcctatatcagtgactgtaccagagttataccc tgaagtcagcccagagtgtaatactgatgctgatgaatacgattgtagtcccttcctgcagtcagtacagtctacgttag ccactctcttacttagaatgccaaatagatttacatttaccgagctcatggataaatgggagatgagcatacgtcgagcg tgtgtagcagctactccctcataa |
Protein
Protein ID | pfu_aug2.0_204.1_13790.t1 |
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Definition | - |
>pfu_aug2.0_204.1_13790.t1 MADQMMDWRSEQFRRKVITQIDEAIRSAPTPMTKSSAEMENHVFLKAKTRDYWCMKTAYVGCTHWVLLKTKGKYEIADQS DITVFLHKEEYESEIEQELGVHKLKQRRAPRKKHDCLFVVDNVPLRILHPRHIFKKTCAKILHFKSPRDRHMSXHFISRN NIFRTNSRCTDAGMGYVCMVFPRKAGKILIKLSWKIGADIPDTALGGSHRVGPKQRGQARPIIAKFVGHNFKTRLLKNKN KLRGSTPQIFINEDLTSSWDQQKEREKQQAVGVGGMPQGLGPRGVPGQPMQQDPLKSLQTLTMQGTSGLGPGQPQQQPGM MTQQQQQQLLLRQQQLQQQRHQQQLAQMQASNRPPLQRQDAFMVTSTQHVQSTAQPLPASSTSQIGYNQPGMPAPGMQPT PGMQQAPGMQAAPGMQPAPGMQQAPGMQAAPGMQPAPGMQQRQGMATGQMVNMMPTQASQFGPQGMAGPSQGQMDGQALQ QGTQPAPSPKSMMASPSPQAGIVPSPASRGQPFSAPSPSSVLNTPGNPNSQSQVSPAPRSHEEQAYLDKLNKLSKYIEPL RRMINKLSTNRDEERKKDISKMEGLLKILTDPSKRLPMATLQKCEQVLDKLELSLKPSSVSKAPTPTVSTHMCQPLIDAV AAHMQSPMFNHCLQQTFGPAVTALYGSPIRAPSPPPKRKYEELEEEEEDEIPHILQGEIARLGNRFKVTLDPTQHSLSNA IHLLCRIDDKRLPSVPPISVTVPELYPEVSPECNTDADEYDCSPFLQSVQSTLATLLLRMPNRFTFTELMDKWEMSIRRA CVAATPS |