Gene
Gene Model ID | pfu_aug2.0_214.1_13802 |
---|---|
Locus | scaffold214.1 : 77114 ... 92835 : - |
To GenomeBrowser | scaffold214.1:77114..92835 |
Genes list of scaffold | scaffold214.1 |
Synonym | pfu_aug1.0_33972.1_19513 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_214.1_13802.t1 | 2 | 1 | Carb_anhydrase | 33 | 108 | 7.9e-29 | 100.3 | 9.2e-15 | 6.8e-11 | 41.6 |
pfu_aug2.0_214.1_13802.t1 | 2 | 1 | Collagen | 136 | 186 | 9.9e-15 | 53.8 | 7.6e-12 | 5.6e-08 | 32.2 |
pfu_aug2.0_214.1_13802.t1 | 2 | 2 | Collagen | 161 | 219 | 9.9e-15 | 53.8 | 8.6e-13 | 6.3e-09 | 35.2 |
pfu_aug2.0_214.1_13802.t1 | 2 | 2 | Carb_anhydrase | 259 | 333 | 7.9e-29 | 100.3 | 6.5e-20 | 4.8e-16 | 58.4 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_214.1_13802.t1 | gi|82539404|ref|XP_724092.1| | hypothetical protein [Plasmodium yoelii yoelii 17XNL] | 1.0e-19 |
pfu_aug2.0_214.1_13802.t1 | gi|505856698|ref|XP_004621752.1| | 1.0e-09 | |
pfu_aug2.0_214.1_13802.t1 | gi|311977572|ref|YP_003986692.1| | collagen-like protein 2 [Acanthamoeba polyphaga mimivirus] | 9.0e-09 |
Transcript
Transcript ID | pfu_aug2.0_214.1_13802.t1 |
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Definition | - |
>pfu_aug2.0_214.1_13802.t1 atggagaaattaaaaacagaagtgaccaatcatcagaaccgagctccagagttcgagccagaggatggggaaaatctgta cgtgaagctaaataacctagtggacggtcattataaattccataatcttcacgttcataatggtagaaccagacgtaagg gatcagaacacagtgttaacggtcgtttcacacctatggaggctcatttggttttccatcatgatgaacaaacacacttt gaacctacacgcactaagctgggaggagcattccctggtcataacgattttgtcgtcgttggagtttttcttgaggtcgg agatgacggctttggcgacgaaccggatgacgaagaatgtaaacacatcttaaagggacatcaccctgataataacgaga acggcaatggagacaacggcaataacggctacaatggggacaacggtaacaatggtgacaacggcaataacggctacaat ggggacaacggtaacaatggtgtcaacggcaataacggctacaatggggacaacggtaacaatggagacaacggcaataa cggctacaatggggacaacggtaacaatggtgacaacggcaataacggtgaaaacggcaataacggtgaaaacggcaata acggtgaaaatggtcacaaacacggatgtcgggtaaagaaagcaaagcatctcagtaggatcctggaatgtgcttataga aacgataaggtcagagagttcaagaaagttggagaagaggaagggttagatgttcatctaacaccggagatggctttgcc gccacttaagtacagacattactatacatacgagggatccctgaccactcccccttgtacagagtctgtcctctgggttg ttcaaaaatgccatgtgcaggtgtcaagaagggttcttcatgcattacgaaatgttgaaggatataaagatggtaccaca cttagaaagtatggaactagacgtccaacacaaaagaataaagttactgtgtacaaaagcttcaaatag |
Protein
Protein ID | pfu_aug2.0_214.1_13802.t1 |
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Definition | - |
>pfu_aug2.0_214.1_13802.t1 MEKLKTEVTNHQNRAPEFEPEDGENLYVKLNNLVDGHYKFHNLHVHNGRTRRKGSEHSVNGRFTPMEAHLVFHHDEQTHF EPTRTKLGGAFPGHNDFVVVGVFLEVGDDGFGDEPDDEECKHILKGHHPDNNENGNGDNGNNGYNGDNGNNGDNGNNGYN GDNGNNGVNGNNGYNGDNGNNGDNGNNGYNGDNGNNGDNGNNGENGNNGENGNNGENGHKHGCRVKKAKHLSRILECAYR NDKVREFKKVGEEEGLDVHLTPEMALPPLKYRHYYTYEGSLTTPPCTESVLWVVQKCHVQVSRRVLHALRNVEGYKDGTT LRKYGTRRPTQKNKVTVYKSFK |