Gene
Gene Model ID | pfu_aug2.0_2151.1_05427 |
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Locus | scaffold2151.1 : 35116 ... 36175 : - |
To GenomeBrowser | scaffold2151.1:35116..36175 |
Genes list of scaffold | scaffold2151.1 |
Synonym | pfu_aug1.0_1868.1_37158 |
Manual annotation
Annotation by Blast2GO
Annotation | GO |
---|---|
neurogenin transcription factor | GO:0046983 GO:0048513 GO:0048666 |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_2151.1_05427.t1 | 1 | 1 | HLH | 98 | 150 | 3.2e-16 | 58.7 | 1.2e-19 | 5.9e-16 | 57.8 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_2151.1_05427.t1 | gi|390353324|ref|XP_003728087.1| | PREDICTED: neurogenin-2-like [Strongylocentrotus purpuratus] | 4.0e-26 |
pfu_aug2.0_2151.1_05427.t1 | gi|269784897|ref|NP_001161600.1| | neurogenin transcription factor [Saccoglossus kowalevskii] | 5.0e-25 |
pfu_aug2.0_2151.1_05427.t1 | gi|557002422|ref|XP_006003536.1| | PREDICTED: neurogenin-1 [Latimeria chalumnae] | 3.0e-24 |
pfu_aug2.0_2151.1_05427.t1 | gi|118344352|ref|NP_001071999.1| | transcription factor protein [Ciona intestinalis] | 3.0e-23 |
pfu_aug2.0_2151.1_05427.t1 | gi|260802728|ref|XP_002596244.1| | hypothetical protein BRAFLDRAFT_117981 [Branchiostoma floridae] | 6.0e-23 |
Transcript
Transcript ID | pfu_aug2.0_2151.1_05427.t1 |
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Definition | - |
>pfu_aug2.0_2151.1_05427.t1 atgaccaccaaagtggactttgattttatatcatcaccagtgaatgacacttgcctaagttccacatcgtcttatccata ttcatcacaatcatcggtttctgcagtggacatttcgtcagagatggactttgatagttcttgtatgggagaagtctttg ttaacgatgcagagtctgaaacacccgtttctgtaccacagaagactgacgctaccccaaaacgtaaacgatacaataaa tccaggaaaagagaaaggagtccaggattagtagaaaaactcaagaaaaccagacgatcgaaggcaaacgacagagagag gaacaggatgcatggacttaatgatgctttggagcgactgaggaaagttttgccgacaaacaatagtggtgaaaacaagc ttaccaagatagaaacactcagaatggcttacaattatatatggacactgtcgcagactttggaactattggataagatt cccgatcaaggacacaatgacattccgcagacgatcgtgaagtcagagtcgcagaacatgccgtgtcgtctgcagactcc gcctcagcatccggactgttcttttatatctgttgaccaacatcagaacttacaaaactccaaattcgtcttgcagaata caaattgtttcaaagtgacatcggattgtgtaaatgatatacatggatctccgttacgccattttgtgacgcccgttacc agctcaagtccagcgttccgtgcgtctttactacctccagtaatctcggacagctctgtggtgacgccagtgacacattc gatgggtaacggacattacggatggggaaatataccctactacacagagaatttcccttctagtcccgctgaacactcgg acacttctgatggattttcgtacgagatgttcccatag |
Protein
Protein ID | pfu_aug2.0_2151.1_05427.t1 |
---|---|
Definition | - |
>pfu_aug2.0_2151.1_05427.t1 MTTKVDFDFISSPVNDTCLSSTSSYPYSSQSSVSAVDISSEMDFDSSCMGEVFVNDAESETPVSVPQKTDATPKRKRYNK SRKRERSPGLVEKLKKTRRSKANDRERNRMHGLNDALERLRKVLPTNNSGENKLTKIETLRMAYNYIWTLSQTLELLDKI PDQGHNDIPQTIVKSESQNMPCRLQTPPQHPDCSFISVDQHQNLQNSKFVLQNTNCFKVTSDCVNDIHGSPLRHFVTPVT SSSPAFRASLLPPVISDSSVVTPVTHSMGNGHYGWGNIPYYTENFPSSPAEHSDTSDGFSYEMFP |