Gene
Gene Model ID | pfu_aug2.0_2361.1_05500 |
---|---|
Locus | scaffold2361.1 : 42926 ... 44010 : + |
To GenomeBrowser | scaffold2361.1:42926..44010 |
Genes list of scaffold | scaffold2361.1 |
Synonym | pfu_aug1.0_3558.1_08659 |
Manual annotation
Annotation by Blast2GO
Annotation | GO |
---|---|
fer3-like protein | GO:0046983 |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_2361.1_05500.t1 | 1 | 1 | HLH | 129 | 180 | 1.6e-15 | 56.5 | 1.8e-19 | 2.6e-15 | 55.8 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_2361.1_05500.t1 | gi|524865268|ref|XP_005089464.1| | PREDICTED: protein twist-like [Aplysia californica] | 5.99756e-43 |
pfu_aug2.0_2361.1_05500.t1 | gi|676435981|ref|XP_009047733.1| | hypothetical protein LOTGIDRAFT_58541, partial [Lottia gigantea] | 1.0e-36 |
pfu_aug2.0_2361.1_05500.t1 | gi|291226431|ref|XP_002733196.1| | PREDICTED: myoblast determination protein 1 homolog [Saccoglossus kowalevskii] | 9.0e-35 |
pfu_aug2.0_2361.1_05500.t1 | gi|585650327|ref|XP_006814556.1| | PREDICTED: neurogenin-1-like [Saccoglossus kowalevskii] | 4.0e-29 |
pfu_aug2.0_2361.1_05500.t1 | gi|91095215|ref|XP_969233.1| | PREDICTED: protein Fer3 [Tribolium castaneum] | 5.0e-29 |
Transcript
Transcript ID | pfu_aug2.0_2361.1_05500.t1 |
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Definition | - |
>pfu_aug2.0_2361.1_05500.t1 atggagggacacgtgtcagaacatagcacttcagtatacgacaaccagagttcactacctagctacgctactgcaagtag ttcttccggaagtcttgtccaagcaatgtatgcagattacggcagtgactggcatactgccccggtggacccaacgcggg caacgcccgagtacccaacatatatgggctatacccatgtcgcccagggcgatttagtgacaaatggggcttattggccc ggcgaaattggcatgcatccgagtttgccctacaacccgtatgcacacccggaatccatgcagggtttggattttagtca gcactcaccgcagagtttgggcaaaaacggcaaaccgaaacggaagcgtgtacagactgtgacgcagagaagagctgcaa atatcagagagcgaagacgcatgtttcatctaaatgaggctttcgacgatctcagaaaaagacttccagcttttaattac gaaaagagattatcaagaatcgaaactctgaggttggctattacatacatttctttcatgaaggacataagcgacgggga agatccgaaaaacgtaaagttaaaaacccataaatccagtgacattttgtatcctgaattatcagaaaatatgaacagtg acgattcgctaagttcgtga |
Protein
Protein ID | pfu_aug2.0_2361.1_05500.t1 |
---|---|
Definition | - |
>pfu_aug2.0_2361.1_05500.t1 MEGHVSEHSTSVYDNQSSLPSYATASSSSGSLVQAMYADYGSDWHTAPVDPTRATPEYPTYMGYTHVAQGDLVTNGAYWP GEIGMHPSLPYNPYAHPESMQGLDFSQHSPQSLGKNGKPKRKRVQTVTQRRAANIRERRRMFHLNEAFDDLRKRLPAFNY EKRLSRIETLRLAITYISFMKDISDGEDPKNVKLKTHKSSDILYPELSENMNSDDSLSS |