Gene
Gene Model ID | pfu_aug2.0_240.1_00490 |
---|---|
Locus | scaffold240.1 : 395656 ... 399169 : + |
To GenomeBrowser | scaffold240.1:395656..399169 |
Genes list of scaffold | scaffold240.1 |
Synonym | pfu_aug1.0_371.1_07490 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_240.1_00490.t1 | 1 | 1 | Git3 | 40 | 221 | 5.6e-08 | 32.5 | 1.3e-11 | 9.6e-08 | 31.8 |
pfu_aug2.0_240.1_00490.t1 | 1 | 1 | 7tm_1 | 69 | 295 | 3.0e-08 | 33.1 | 5.5e-12 | 4.1e-08 | 32.6 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_240.1_00490.t1 | gi|156390727|ref|XP_001635421.1| | predicted protein [Nematostella vectensis] | 2.0e-06 |
Transcript
Transcript ID | pfu_aug2.0_240.1_00490.t1 |
---|---|
Definition | - |
>pfu_aug2.0_240.1_00490.t1 atggactctgataacctgaccactccgtctgctgcccatgtccccggggacgggtatgatctaccagtgtacgggatagc caatggtcagttttacaatctacatgtaccggccctcacctgtatatttctcggcctcctcacagtgattggcgttttgg tggcatccttcagactacagagttatcggactttcttctcttggtccaagagcgagcgatttgtagtgtatttggcgcta tgtgatggcctatttaacatcgctcactccatggaccacctacacataattataaccaggaaccatgtatatcccaagga actctgccaattctacggatttatgctcaccgagttcatcacagcacaaaatttgatggtcaatgttgttgctttcaatg ctttcatacttatatactttaggaaaaacgcagagttcggaaagtacgactggcgactcctcctgtacacgttcggaacg ccttttgtggcagcgtcaatcgcagcggctcttgggacattaggaacgaatggtgctttctgttatttcgatggcgtgaa gggtgagcttgccaacattttcttcaccaccatccctctcctgctcatactgtcaataaacatcgtactgtattgtctga cctggcaccgcattcatgacgaggccgtgcgtctccaagactctttgggtaaagacgccagaatgatccgtgcgtcacat aaggcggcccgtaccatgtctctctttgtggcggccttcttcgtacagtggtgggccatggcactgtacggtatatggca gcttgtagcagaggtaccacagaccctatttcagtttgtcaccaccttttctaacattggaggaattctcaacggaattg tgtatataattataagacgacggaaattaatggggcctaaagaatcttccggaagtcgagaagacattgtttcacaggat tctgggaaagggactctgaacagcatttgtaatactgtagatatggtctcatttaaaaagaccgaggagttttga |
Protein
Protein ID | pfu_aug2.0_240.1_00490.t1 |
---|---|
Definition | - |
>pfu_aug2.0_240.1_00490.t1 MDSDNLTTPSAAHVPGDGYDLPVYGIANGQFYNLHVPALTCIFLGLLTVIGVLVASFRLQSYRTFFSWSKSERFVVYLAL CDGLFNIAHSMDHLHIIITRNHVYPKELCQFYGFMLTEFITAQNLMVNVVAFNAFILIYFRKNAEFGKYDWRLLLYTFGT PFVAASIAAALGTLGTNGAFCYFDGVKGELANIFFTTIPLLLILSINIVLYCLTWHRIHDEAVRLQDSLGKDARMIRASH KAARTMSLFVAAFFVQWWAMALYGIWQLVAEVPQTLFQFVTTFSNIGGILNGIVYIIIRRRKLMGPKESSGSREDIVSQD SGKGTLNSICNTVDMVSFKKTEEF |