Gene
Gene Model ID | pfu_aug2.0_26925.1_20001 |
---|---|
Locus | scaffold26925.1 : 1 ... 552 : + |
To GenomeBrowser | scaffold26925.1:1..552 |
Genes list of scaffold | scaffold26925.1 |
Synonym | pfu_aug1.0_16692.1_03746 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_26925.1_20001.t1 | 1 | 1 | UPF0029 | 35 | 124 | 3.3e-11 | 42.8 | 2.7e-15 | 4.1e-11 | 42.5 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_26925.1_20001.t1 | gi|71995232|ref|NP_001021782.1| | Y52B11A.2, isoform a [Caenorhabditis elegans] | 1.0e-05 |
pfu_aug2.0_26925.1_20001.t1 | gi|268560086|ref|XP_002646130.1| | Hypothetical protein CBG08009 [Caenorhabditis briggsae] | 1.0e-05 |
Transcript
Transcript ID | pfu_aug2.0_26925.1_20001.t1 |
---|---|
Definition | - |
>pfu_aug2.0_26925.1_20001.t1 aacgcagatgttctacaaataccggaaacggaacaacgaaacctcgaaaacgtccggatgtatacaaccgaatgcgagga gagacaaggtacgcaaatgtttgcttccggttctgaagtgcgctccatagatgatgttcagaatttgtatcggaaagtgt gtagtttgccagattctgccagttccgatcatagaattcttgtatatagatttaaggatgaagctaggaagttaaccgaa aactatcacgatgagggcgaacatggcgctgggcgacgcttactccagtatatgagggacaatgaaatgtgtaacattgc ggttgttatctcaaaatggaatggggagaggaaaatttgtttcgaacgtttcggcgttatggaatatttagtgtgctccg tctacaacgaactggaggactaa |
Protein
Protein ID | pfu_aug2.0_26925.1_20001.t1 |
---|---|
Definition | - |
>pfu_aug2.0_26925.1_20001.t1 NADVLQIPETEQRNLENVRMYTTECEERQGTQMFASGSEVRSIDDVQNLYRKVCSLPDSASSDHRILVYRFKDEARKLTE NYHDEGEHGAGRRLLQYMRDNEMCNIAVVISKWNGERKICFERFGVMEYLVCSVYNELED |