Gene
Gene Model ID | pfu_aug2.0_2837.1_25558 |
---|---|
Locus | scaffold2837.1 : 60635 ... 69995 : - |
To GenomeBrowser | scaffold2837.1:60635..69995 |
Genes list of scaffold | scaffold2837.1 |
Synonym | pfu_aug1.0_9091.1_67982 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_2837.1_25558.t1 | 1 | 1 | Xan_ur_permease | 11 | 167 | 5.5e-14 | 51.4 | 1.1e-17 | 7.9e-14 | 50.9 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_2837.1_25558.t1 | gi|49522700|gb|AAH75651.1| | RIKEN cDNA 2010107G12 gene [Mus musculus] | 0.0 |
pfu_aug2.0_2837.1_25558.t1 | gi|282721100|ref|NP_001020744.2| | uncharacterized protein LOC243753 [Mus musculus] | 0.0 |
pfu_aug2.0_2837.1_25558.t1 | gi|390351563|ref|XP_789568.3| | 0.0 | |
pfu_aug2.0_2837.1_25558.t1 | gi|260832432|ref|XP_002611161.1| | hypothetical protein BRAFLDRAFT_88440 [Branchiostoma floridae] | 0.0 |
Transcript
Transcript ID | pfu_aug2.0_2837.1_25558.t1 |
---|---|
Definition | - |
>pfu_aug2.0_2837.1_25558.t1 atgagagaggaatctcatgttctagtatctcaagaaatacagggtaacttgatgttggcgtccctcgtacagttcttatt gggatgtagtggcttggttgggttcttcctccagtttataggaccgctgaccattgcacccaccatatccctgatcggac tgtcccttacaggcgtggccgcagactttaacaaagtacattgggggatagccattctaactcttggactgattgcgata ttcagcttgtacttaggatcgatcaagattccatttccgacatactccaagaagaggaactgtcatgttgctcgatttca aatgttcaaattgctaccggtcattctgagcgttatactaagctggatactgtgccatatactgaccattaccgataatg taccaaacgacagtactcatgtcaactactatacaagaactgacgcccgcttgtccgtattaaactccatgccttggttt tattttccaactccttgaagtgacgatttagatcaagtgttgggtgtgttacttggtaccgccatgtttgttggtggact gataggatttatcttggacaatactgttcctgggtcagatgaagagcgtggtatccttaaatggagggccaatatgtacg aggagggagagcaggatgcaaagactcacgttcaatacgaaatacctttcataacgtccgttcttaggaaagtcaaatgc tgttcgtatgtccctgtgtcacctacatttgataaagtaataaactgtccttgttctaaagattccaaagaggagtatac agtgggtgatgaggacagagctaatgataatgttaaattggaaaacttgaatgagaaactgtag |
Protein
Protein ID | pfu_aug2.0_2837.1_25558.t1 |
---|---|
Definition | - |
>pfu_aug2.0_2837.1_25558.t1 MREESHVLVSQEIQGNLMLASLVQFLLGCSGLVGFFLQFIGPLTIAPTISLIGLSLTGVAADFNKVHWGIAILTLGLIAI FSLYLGSIKIPFPTYSKKRNCHVARFQMFKLLPVILSVILSWILCHILTITDNVPNDSTHVNYYTRTDARLSVLNSMPWF YFPTPXSDDLDQVLGVLLGTAMFVGGLIGFILDNTVPGSDEERGILKWRANMYEEGEQDAKTHVQYEIPFITSVLRKVKC CSYVPVSPTFDKVINCPCSKDSKEEYTVGDEDRANDNVKLENLNEKL |