Gene
Gene Model ID | pfu_aug2.0_3.1_10053 |
---|---|
Locus | scaffold3.1 : 753128 ... 755211 : - |
To GenomeBrowser | scaffold3.1:753128..755211 |
Genes list of scaffold | scaffold3.1 |
Synonym | pfu_aug1.0_4230.1_16316 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_3.1_10053.t1 | 1 | 1 | AIG1 | 48 | 199 | 3.3e-18 | 65.5 | 1.0e-19 | 1.3e-16 | 60.3 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_3.1_10053.t1 | gi|688533407|ref|XP_009291146.1| | PREDICTED: GTPase IMAP family member 7 [Danio rerio] | 3.0e-15 |
pfu_aug2.0_3.1_10053.t1 | gi|548553511|ref|XP_005755574.1| | PREDICTED: GTPase IMAP family member 7-like, partial [Pundamilia nyererei] | 1.0e-14 |
pfu_aug2.0_3.1_10053.t1 | gi|542224545|ref|XP_005451620.1| | PREDICTED: GTPase IMAP family member 4-like [Oreochromis niloticus] | 2.0e-14 |
Transcript
Transcript ID | pfu_aug2.0_3.1_10053.t1 |
---|---|
Definition | - |
>pfu_aug2.0_3.1_10053.t1 atggctacagcaggaagagaaagcttacctacttgctcagattctgaactgcgtgttttaatcatgggaagtgactctct ccttcaagcctcaatagctgaatttcttttacaacttcaaaactcatcgaacacttctccaagtgacaggtgtcatgtga cacacaatgttgttggtgacaaggacatcgttgtgataaatgctcctggcctacttgacggtaatctgagtgaagaaaaa ttaaaactagaactacagcgtctatactttcagtcatccccaggtccgcacgtcatgctgtatgtaagtaagtgttacga acgtgatatagacaaggctgtgtatgaaaggatggtcgccatctttggcaaggaattagtggataggtctatttttgtat ttcaggaatatggtgatatgatggatttttctttgtcaatgaggagaccggctaggtttaaaagaaaagtaccggtatct cagagaactcgaaacgaacactctgaattactgagtaaaatagaggaggttgttcaagagtataacggtacgtactttgt aaatgagatgctaagagaggcagaaaaatgtctccaagagcacacaaaaattctgctgtcgaagactcaaactggaaaag aactggaaatgttaaaacaacagcttctggatatgaaatccaagcaggaagaggataagaaaaggatagaagagttagaa ggacgaatacatcaggcaactgaggcgagtaataaaacagaagtgactttgaggaaagaggagcgagataaatttatcaa tgacgaaatgatgcagagagtgtatagaggacttatgtatgttagtgaaaaactcatattacaaggaattgttgtggtgg ttagatcctatctaggattttga |
Protein
Protein ID | pfu_aug2.0_3.1_10053.t1 |
---|---|
Definition | - |
>pfu_aug2.0_3.1_10053.t1 MATAGRESLPTCSDSELRVLIMGSDSLLQASIAEFLLQLQNSSNTSPSDRCHVTHNVVGDKDIVVINAPGLLDGNLSEEK LKLELQRLYFQSSPGPHVMLYVSKCYERDIDKAVYERMVAIFGKELVDRSIFVFQEYGDMMDFSLSMRRPARFKRKVPVS QRTRNEHSELLSKIEEVVQEYNGTYFVNEMLREAEKCLQEHTKILLSKTQTGKELEMLKQQLLDMKSKQEEDKKRIEELE GRIHQATEASNKTEVTLRKEERDKFINDEMMQRVYRGLMYVSEKLILQGIVVVVRSYLGF |