Gene
Gene Model ID | pfu_aug2.0_301.1_03963 |
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Locus | scaffold301.1 : 72957 ... 84905 : - |
To GenomeBrowser | scaffold301.1:72957..84905 |
Genes list of scaffold | scaffold301.1 |
Synonym | pfu_aug1.0_1537.1_66019 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_301.1_03963.t1 | 2 | 1 | UBX | 194 | 211 | 5.3e-17 | 61.6 | 5.4 | 13000.0 | -3.8 |
pfu_aug2.0_301.1_03963.t1 | 2 | 2 | UBX | 568 | 643 | 5.3e-17 | 61.6 | 6.4e-20 | 1.6e-16 | 60.1 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_301.1_03963.t1 | gi|524897406|ref|XP_005105164.1| | PREDICTED: FAS-associated factor 1-like [Aplysia californica] | 0.0 |
pfu_aug2.0_301.1_03963.t1 | gi|564250475|ref|XP_006264303.1| | PREDICTED: FAS-associated factor 1-like [Alligator mississippiensis] | 0.0 |
pfu_aug2.0_301.1_03963.t1 | gi|635108249|ref|XP_007976982.1| | PREDICTED: FAS-associated factor 1 isoform X6 [Chlorocebus sabaeus] | 0.0 |
pfu_aug2.0_301.1_03963.t1 | gi|557285152|ref|XP_006025383.1| | PREDICTED: FAS-associated factor 1 [Alligator sinensis] | 0.0 |
pfu_aug2.0_301.1_03963.t1 | gi|543741725|ref|XP_005511731.1| | PREDICTED: FAS-associated factor 1 [Columba livia] | 0.0 |
Transcript
Transcript ID | pfu_aug2.0_301.1_03963.t1 |
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Definition | - |
>pfu_aug2.0_301.1_03963.t1 atgatggaggaacccaagtggcgaccaattgccgaacgtcgctgtgaccggcgtctcatatcactcgacaaaattgtaca tggcccagcattcactggcctagaagatatcgaaacctgcatcggtattctggaacagaatgattgggacttgatgaaat cggtcaccagtgttatgccaggaaatgatggaggcaatatttcaccgtcaggcggggaacctccccctatatattcccca atggatgtagaggacataagtcccccgccttatccgaaatctagttttgtcggagatgtggcagatgccgtaccgatctt cgatcctagttctgctgctgggccgtcaacgtcggcggctattccatcaacaagctttgggtcagcaaagaaaagtcgat ctggtggaggagctagaattctgaattttaaagttgaatacagagatcagaatgtgtatctcagtgtcccagacacagaa cctgtcatgaaagtgaagactttactatcagagaaactgggcataccatctgagagacagcatctgagaggctggagtac aaggaagactagggtggaagacgacaaaatacttcaagagctacatttaccaaaggagaataccttattcctgcttaccc cggacatacctaatcctacactgatcaagccaagacaagaaaatgacgatttagaaaatttaacactgactgaggctctc aacagaacctacacattacacataactttctctgacaatggacggagtaacacctacaatctcaacatgcagggatgtaa aacaattggcgaggttaactatggatatgatgtagatatcgacctagagaacagtgatgacgatgatgacatgaacgcat cgatagacgacgagctgtttgatcaagacgacagaatagcaaacaaacaaactctcctcatgcctgaatcagtcaaagat gaggtagatgctttggaacattttaccaaagaattcagggaaaggtatggggaatcacatccagtcttttttgtgggttc cttagaaaatgcccttaaagaggctcttcagggtagagccaaagataggaagttactagccatttaccttcatcatgatg ccagtattttatccaatgtgttttgttctcaaattctatgtgcagagagtatcgtcaatttcctcagtgcaaatttctta acgtgggcttgggatatgacaaatgaaaccaattctgccaggttgatcaccatggttacgaggcactttggtaatgtggt ggctggtcagatacgaggtcacagacccgatcagcttcctatgatgatgattatatctaggtcaagggcaacaaatgaag ttgttgatatgatctcaggttctctgtcactggatgaagtgatgatgaggctaattcatgattctgaaagcttccaggaa cagcaaaaggcagacattcaagacgaggaggagcgtgatgctcgggagagaataaggagagaacaagaggaagctttcca agaatcactagctgctgataagagaaaggctgaagaacagaagaggttacaagaagaagagatacgaaaacaaaaagagg aggaaagtaaaaggcaagaggaagaacaacgaaaaatggcaatacaggaagtagcagctacgcagattcctgacgaaccc acggaaagttgtaaacttcccgttagctgtctcaggttccgtatgccagatggcaccatcaaaagtcgacgatttctggc gtctgaaccactgaaacatgtcttgtatttcatcacatcagagggctttcatacagaggattataaagtattaacaactt tccctaggagagatatttcacagctggaagaggataggtctttagaagaattgaaactttatccgcaagaaacattaata ctggaggaaagatga |
Protein
Protein ID | pfu_aug2.0_301.1_03963.t1 |
---|---|
Definition | - |
>pfu_aug2.0_301.1_03963.t1 MMEEPKWRPIAERRCDRRLISLDKIVHGPAFTGLEDIETCIGILEQNDWDLMKSVTSVMPGNDGGNISPSGGEPPPIYSP MDVEDISPPPYPKSSFVGDVADAVPIFDPSSAAGPSTSAAIPSTSFGSAKKSRSGGGARILNFKVEYRDQNVYLSVPDTE PVMKVKTLLSEKLGIPSERQHLRGWSTRKTRVEDDKILQELHLPKENTLFLLTPDIPNPTLIKPRQENDDLENLTLTEAL NRTYTLHITFSDNGRSNTYNLNMQGCKTIGEVNYGYDVDIDLENSDDDDDMNASIDDELFDQDDRIANKQTLLMPESVKD EVDALEHFTKEFRERYGESHPVFFVGSLENALKEALQGRAKDRKLLAIYLHHDASILSNVFCSQILCAESIVNFLSANFL TWAWDMTNETNSARLITMVTRHFGNVVAGQIRGHRPDQLPMMMIISRSRATNEVVDMISGSLSLDEVMMRLIHDSESFQE QQKADIQDEEERDARERIRREQEEAFQESLAADKRKAEEQKRLQEEEIRKQKEEESKRQEEEQRKMAIQEVAATQIPDEP TESCKLPVSCLRFRMPDGTIKSRRFLASEPLKHVLYFITSEGFHTEDYKVLTTFPRRDISQLEEDRSLEELKLYPQETLI LEER |