Gene
Gene Model ID | pfu_aug2.0_332.1_07367 |
---|---|
Locus | scaffold332.1 : 98239 ... 125725 : - |
To GenomeBrowser | scaffold332.1:98239..125725 |
Genes list of scaffold | scaffold332.1 |
Synonym | pfu_aug1.0_7.1_14667 |
Manual annotation
Annotation by Blast2GO
Annotation | GO |
---|---|
neuronal acetylcholine receptor subunit alpha-2 isoform 1 | GO:0006810 |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_332.1_07367.t1 | 2 | 1 | Neur_chan_LBD | 34 | 127 | 5.3e-36 | 123.7 | 6.6e-17 | 2.5e-13 | 49.7 |
pfu_aug2.0_332.1_07367.t1 | 2 | 1 | Neur_chan_memb | 124 | 149 | 1.7e-22 | 80.5 | 0.74 | 2700.0 | -2.1 |
pfu_aug2.0_332.1_07367.t1 | 2 | 2 | Neur_chan_LBD | 174 | 278 | 5.3e-36 | 123.7 | 1.1e-24 | 4.1e-21 | 75.1 |
pfu_aug2.0_332.1_07367.t1 | 2 | 2 | Neur_chan_memb | 285 | 436 | 1.7e-22 | 80.5 | 6.9e-26 | 2.5e-22 | 79.9 |
Transcript
Transcript ID | pfu_aug2.0_332.1_07367.t1 |
---|---|
Definition | - |
>pfu_aug2.0_332.1_07367.t1 atgatgttcgcatcaagattgactttggcattactatgctttcaaacattacagatatgccaaacacagtggtccccggg actggagcaaaatctgaaaacgcaattgtacaccacgaatggttacgataaatctataaggcctaacgagtccatgagta ttgtggtgtcattttcattgttcagtgttaatgagttggacatagtcaatcagaaactggattttgcaggatattttcat gtgaaatgggaagattaccgactagagtggtcatcaagtccaacctacgctagtgtggcgtccttcttcacaagttcaga atacacatgggtacctggccttgtcatgatgaatgcaaaatcagaaaccgaagtcgtacaaaatcaggataaaacaggaa ccaaagcaaataagcaaaaacctccaccacatgaaaagaagcgaagtcccgatattggagtgggaccaggtgcccaggaa gaagtatggaatctggacgtttgggatgatgacgatgatccaatgagagtaaccagcagcggtaccgttatatggaatca tattgggtcattcatatccagttgtgaatctgatgtcacctactatccgtttgatacacaggattgtgacatcacaataa ccacttggggttatacgagcactgaaatatccctttcctgggatacatcacaaggtcaagccttggacatgaacttctac agcgaaaacggagaatgggaatatcaaagttatgagccatcgacatcaacaattacacgtggtccagaaaactacaaaat actcacgattactcttaagttcagaaggagacccttatttcagttcattaacaccattttgccctgtctttgtctggcat ttttgggttgctttgtctttcgactacctgctgatagtggagaaaagatgggatacagtctaacggtacttctagcatat gccgtttaccttaccttagtctccgctagtatgcctacaacttcaatcaaaacatcagtcatgtctgtatacctggtgtt aacacttatatttggaataataggatctttcataacaatctacgtgttagtgtgtcaccataggtcagacgataagaaga tccctcattggctgaggcgaatgataaccggatgtatggtgaagtgtggtaaagtcagaccgtgccggaattccgctgtt tataataatgaagagaaaagtgaagagaaattagactcaggagtggaagctatatccaatatggataaaaagttagcgaa taaacagtctcaaaataataaggaggaaaaagacgatttaacatggcagaaaatatccgaaataatggatgcgtttttct ttaagggggaagggggttccatggataaagataacgagtggcaaaatacagaagtgttcaagaacaggttggttggtcga cagttaacaggtcgacagttgacaggtcgacagttgataggtcgacggtcgacaggtcgacagttgataggtcgacagtt gataggtcgacagttgacaggtcgacagttgacaagtcgacagttgataggtcgacagttgataggtcgacagttgacag gtcgacagttgataggtctacagttgataggtcgacagttgacaggtcgacagttgataggtcgacggttgacaggtcga aagcgttga |
Protein
Protein ID | pfu_aug2.0_332.1_07367.t1 |
---|---|
Definition | - |
>pfu_aug2.0_332.1_07367.t1 MMFASRLTLALLCFQTLQICQTQWSPGLEQNLKTQLYTTNGYDKSIRPNESMSIVVSFSLFSVNELDIVNQKLDFAGYFH VKWEDYRLEWSSSPTYASVASFFTSSEYTWVPGLVMMNAKSETEVVQNQDKTGTKANKQKPPPHEKKRSPDIGVGPGAQE EVWNLDVWDDDDDPMRVTSSGTVIWNHIGSFISSCESDVTYYPFDTQDCDITITTWGYTSTEISLSWDTSQGQALDMNFY SENGEWEYQSYEPSTSTITRGPENYKILTITLKFRRRPLFQFINTILPCLCLAFLGCFVFRLPADSGEKMGYSLTVLLAY AVYLTLVSASMPTTSIKTSVMSVYLVLTLIFGIIGSFITIYVLVCHHRSDDKKIPHWLRRMITGCMVKCGKVRPCRNSAV YNNEEKSEEKLDSGVEAISNMDKKLANKQSQNNKEEKDDLTWQKISEIMDAFFFKGEGGSMDKDNEWQNTEVFKNRLVGR QLTGRQLTGRQLIGRRSTGRQLIGRQLIGRQLTGRQLTSRQLIGRQLIGRQLTGRQLIGLQLIGRQLTGRQLIGRRLTGR KR |